Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1023 ATGGGTCCCGATCAACATCACTCACGTTTTAATTCAAACATGCAACACTACTACTACAACACCACTGACGATGATAACAACCTCGTCAACAATGAGATTGTTGACGACAGCGATGAGTATGAGGAGGATGATGAGTACGGGTACGAGCAAGATGAAAATGAAGAAACCAAAGCCAACGTTATTTTCAACGGTTCTTCACGGCAACAAAAACGTTACTCATCATTTTCATTAAGTCGAGTATTACTTGACCCAAGAGGAAAATGGGCTGAAGAATGGAACAGAGTGTTTCTTTTGGTGTGTGCAATGGGTTTATTTGTGGACCCATTGTTCTTCTATGCACTCTCTATAAGTGACACGTGTATGTGTCTGTTTGTTGATGGTTGGTTTCTCGTTACCGTCACCGTTATCCGTTGCATGACGGACGCGTTACATCTCTGGAATATTTGGTTACAGTTCTATATTCATAAACGCTCCTCATCCTCTTTTGGCTTCATTCATCATGGAACTCCTACTCCTTCCAACAATTCTTCACATGCTCTTCGTTACTTCAAAGCCAACAAAGCCTTTTTCTTTTACATCTTTATCCTCCTCCCTCTTCCTCAGATTGTGCTATGGGTGACAATTCCGTCTCTGTTAGAGCAAGGATTAATTAGGCGGGTTATTACTGTATTGTTGATTATGTTCTTGGTTCAATACCTTCCTAAAATTTATCACTCAGTCTGCTTCGTGCGTCGCAATCTCACAGCTGGTTTCATTTTCGGAACTGTTTGGTGGGGATTCGCTATTAACATGATCGCTTATTTTGTCGCTTCCCATGCAGCAGGGTCATGTTGGTATTTGTTGGGACTTCAAAGGGCAGCTAAGTGTTTAGAAGAACAATGTGAGACAACACCTGGTTGTGGGGTAAGAACATTGTGTTGCAAAGAACCAATATACTATGGAAGCTATAGTATGTTGAAGAAATTAGAGAGAACAAGGTTGGTATGGTCACAGAACAGTGATGCAAGGTCTACTTGCTTAGCTAGTGCTGACAACTATGAATATGGAGTTTATGAATGGAGTGTTCAACTTGTAACAAATAATAGCCGAATAGAAAAGATTCTCCTTCCTATCTTTTGGGGCCTAATGACCCTCAGCACTTTTGGGAACCTTCAGAGCACAACGGAAAGGATGGAAGTCGTTTTCAACACTATTATATTAACCAGTGGCCTTCTTCTAGTCACTATGCTAATTGGAAACATCAAGGTATTTTTACATGCTACGACATCAAAGAAGCAAGCAATGAAATTAAAGATGACAAACTTGGAATGGTGGATGAGCAAAAGAAGGTTGCCACAAGAACTTCGGCAGCGTGTGCGTAACTACGAGAGACAGTGTTGGGCTGCGATGCGCGGGGTTGATGAATGTCAGTTGATCAAAAATCTCCCGGAGGGTTTGAGAAGGGACATCAAGTACCATCTTTGTTTGGGTTTGGTGAGACAGGTACCTTTATTTCAACATATGGATGAATTGGTGCTAGAGAACATTTGTGATCGTGTCAAGTCCCTTGTATTCACGAAGGGAGAAACATTAACAAGAGAGGGAGACCCAGTTCAAAGAATGCTATTTGTGGTAAGGGGTCACCTTCAAACTAGCCAAGTCCTAAGAGATGGAGTTAAAAGTTGTTGTATGTTAGGCCCAGGAAACTTTAGTGGAGATGAGCTTCTATCATGGTGTTTAAGAAGGCCTTTTATAGAACGTCTTCCAACATCATCATCAACATTGGTGACACTTGAAACAGTTGAAGTATTTGGACTTGAAGCAGAGGATGTCAAATATGTGACACAAAATTTCAGGTACACATTTGCAAAAGAAAATGTTAGAAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAGGCATAGGTTGACTTTGACTTCTTTGTCCTTTATTAGACCTCGTAGACCTTTGTCAAGGTCCACTTCTTTGGAAGAGGATAGACTTCGTCTCTACACGGCTTTGTTAACCTCACCAAAGCCCAATCAAGATGATATTGACTCTTCATAA 2088 0.4114 MGPDQHHSRFNSNMQHYYYNTTDDDNNLVNNEIVDDSDEYEEDDEYGYEQDENEETKANVIFNGSSRQQKRYSSFSLSRVLLDPRGKWAEEWNRVFLLVCAMGLFVDPLFFYALSISDTCMCLFVDGWFLVTVTVIRCMTDALHLWNIWLQFYIHKRSSSSFGFIHHGTPTPSNNSSHALRYFKANKAFFFYIFILLPLPQIVLWVTIPSLLEQGLIRRVITVLLIMFLVQYLPKIYHSVCFVRRNLTAGFIFGTVWWGFAINMIAYFVASHAAGSCWYLLGLQRAAKCLEEQCETTPGCGVRTLCCKEPIYYGSYSMLKKLERTRLVWSQNSDARSTCLASADNYEYGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGNLQSTTERMEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNLEWWMSKRRLPQELRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLENICDRVKSLVFTKGETLTREGDPVQRMLFVVRGHLQTSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPTSSSTLVTLETVEVFGLEAEDVKYVTQNFRYTFAKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRSTSLEEDRLRLYTALLTSPKPNQDDIDSS* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1023 695 SMART cnmp_10 497 623 IPR000595 -
Mal4g1023 695 Gene3D Helix hairpin bin 422 488 - -
Mal4g1023 695 SUPERFAMILY cAMP-binding domain-like 423 611 IPR018490 -
Mal4g1023 695 ProSiteProfiles cAMP/cGMP binding motif profile. 497 576 IPR000595 -
Mal4g1023 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 691 - -
Mal4g1023 695 SUPERFAMILY Voltage-gated potassium channels 83 417 - -
Mal4g1023 695 CDD CAP_ED 497 603 IPR000595 -
Mal4g1023 695 Pfam Cyclic nucleotide-binding domain 517 606 IPR000595 -
Mal4g1023 695 Gene3D Jelly Rolls 495 613 IPR014710 -
Mal4g1023 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 9 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1023 Mal-Chr4 14149981 14154289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1023 63 693 Ion Channels AT5G54250 72.799 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1023 K05391 - gmx:100800795 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1023 4 14149981 14154289 Mal4g1023 4 14149981 14154289 ECH