Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1016 ATGATGACCAACAAGAGTAGTTCTAGTGAAAAGAATAAATTGAAGAAAGGTCCATGGTCTCCCGAGGAAGATAAAAAACTCATCGATTATATTCAGAAACATGGATATGGGAAATGGCAAACCCTTTCAAAGAATGCAGGACTAAAAAGATGTGGGAAGAGTTGCAGACTTCGTTGGGCTAATTACTTGAGACCTGATATTAAGAGAGGAAGATTCTCTTTACAAGAAGAAGAAGTCATTATTCAATTACATAGTGTTTTGGGAAACAAGTGGTCTACAATTACTGCTAACTTGCCGGGAAGAACAGATAATGAGATAAAGAATTATTGGAATACTCGCATTAAGAAAAAGCTAATGAAGATGGGGATTGATCCTATGACTCACAAACCTCGTCTTAATGTTCTACAACTTGCCTCTTTTCTCAACTCATCTTTGCAAAATTCACCCCAATTTAACAACTTTGGTCTTTTTGGTATGGGAAGAGTGACAAATCCAAATCACCAGCTTCTGAATTTGCTCACCAATCTACTATCATGTCAAAACAAAAACTCAAATGTTTCAAATAATAATTACCATCAAAACCAATTTAGTGGTAATGGTGACCCTCTATTGCAAAATCAATCCCAATGCTCCCAATCAATCCACCTTGATACTACTTCAATCCAAAATTTTCAATCAAACCAACCCAATTCATCATTTGAAGAAAACCAATGTCTTACGGAATATTCTCATCAACTAATGAAAACAAAATTAGAGAATCAAATCACTCCAATTGCTACATCTTTTAGCCAACAAAACACACTACCAAATTTTTGGCAGTGTCTATTGTCACATATACAACAACATGAATCATCAACTATGAACAATGTCTTGGAAAATCAGATTTCATGTAACAATGAGGGAATGCCAAATTTCAATTTAAGCTCACTTTTTCCATCTCGGCCTTCATCTTCTAGTCCGAGTAATTTGAATTCACAATCTTCGACGACATTTGTCAATGGTGTCATTGAAGATGAAAACGACACTTTTGACAACAACTTGTTGATGTATAATAACATCTCAAATGGCTTGAATGATGCTAGACTTTTGTGA 1092 0.3498 MMTNKSSSSEKNKLKKGPWSPEEDKKLIDYIQKHGYGKWQTLSKNAGLKRCGKSCRLRWANYLRPDIKRGRFSLQEEEVIIQLHSVLGNKWSTITANLPGRTDNEIKNYWNTRIKKKLMKMGIDPMTHKPRLNVLQLASFLNSSLQNSPQFNNFGLFGMGRVTNPNHQLLNLLTNLLSCQNKNSNVSNNNYHQNQFSGNGDPLLQNQSQCSQSIHLDTTSIQNFQSNQPNSSFEENQCLTEYSHQLMKTKLENQITPIATSFSQQNTLPNFWQCLLSHIQQHESSTMNNVLENQISCNNEGMPNFNLSSLFPSRPSSSSPSNLNSQSSTTFVNGVIEDENDTFDNNLLMYNNISNGLNDARLL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1016 363 MobiDBLite consensus disorder prediction 308 328 - -
Mal4g1016 363 Gene3D - 71 118 - -
Mal4g1016 363 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mal4g1016 363 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mal4g1016 363 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Mal4g1016 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Mal4g1016 363 CDD SANT 71 112 IPR001005 -
Mal4g1016 363 CDD SANT 18 63 IPR001005 -
Mal4g1016 363 Gene3D - 7 68 - -
Mal4g1016 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Mal4g1016 363 MobiDBLite consensus disorder prediction 1 21 - -
Mal4g1016 363 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 5 350 - -
Mal4g1016 363 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mal4g1016 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 350 - -
Mal4g1016 363 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mal4g1016 363 SMART sant 68 116 IPR001005 -
Mal4g1016 363 SMART sant 15 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1016 Mal-Chr4 14018196 14019851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1016 5 229 MYB Transcription Factor Family AT4G21440 55.785 3.53e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g1016 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1016 K09422 - gmx:100820398 430.639