Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1005 ATGTTTTTGATGGAAAGCTTCAAGGTTCTAGTTTTGTGTTTTGTTCTATTCAACTTCATACCAAGCTTCAATACCTTGGAAACCATTGTTCCAGGACAATCAATCAAAGATAATGAGACACTAATCTCAAAAGATGGAACTTTTGAAGCAGGATTCTTCAACTTTGGAGATTCAAATAACCAATATTTTGGTGTATGGTACAAGGATATTTCACCAAGAACTGTTGTGTGGATAGCAAATAGAGACTTTCCATTAGGAAACTCATTAGGAGTTTTTAATGTCACTGATAAAGGTACTCTTGTTATTGTTGATTCCAAAGGGAATATGATATGGTCCTCTAATACATCAACAATAGCAACAAAACCAATTGTGCAGATCTTGGATAGTAGTAACCTTGTTGTGAAAGATGAAACCAAACCAGATAAAATTTTGTGGCAAAGTTTTGATGTACCTGGTAACACTTTACTCCCAGGTATGAGAATCAGAAGCAACTTAGTAAATGGTGATTATAAAGGTTTGGTTTCTTGGAGAGATACACAAGATCCTGCTACTGGTTTGTATTCATATCATATAGATACTAATGGTTTACCTCAAGTAGTGATTACAAAAGGAAACTCATTTTATGTTAGAATAGGTTCATGGAATGGAAATATGTTGACTGGAATTCCTTCTACGACACTTTATACGTTCTTTAATTTTTCTTTTGTGATTACGGAGAAGGAAGTTTCTTATGGATATGAACTTTTGAAGCCGTCAATAGTTTCAAGGTACATGCTTACTTCGACAGGTCAAATGACGCGTTACATATTGTCGGACCAGACAGAGAAGTGGCAACTTTTCTTTCTTGGCCCTGCAGACAGTTGTGATAACTATGTTATCTGTGGTGAAAATTCTAATTGTGATGCTAATAACTCACCGATATGTGAATGTCTTGAAGGTTTCATTCCAAAGTCTCAAGAAAAGTGGAATTCACAAATTTGGTCGGATGGTTGCGTTAGGAGAGTCAAGTTAGATTGTGACAACAGGGACGGCTTTTTGAAACGTATGGGAATGAAGTTGCCGGATACATCAAAATCTTGGTTTAATAAGAGCATGAATCTTGAAGAATGTGAGAAATTTTGCCTGAGAAACTGTTCTTGCACAGCATATGCAAATTTAGATGTCAGAGATGGTGGAAGTGGTTGCATACTTTGGTTTAATAACATTCTCGATGTCAAAAAGCTAAGCGCTGGAGGACAAGACCTTTACATAAGAGTTGCAGCTTCAGAACTAGACCATAACACAGGCATCAACAAGAAGCTTGCTGGAATTCTAGTAGGCTGTATAATGTTTATCTTGATCATGATAATTCTGGGAGTTGCCATACGTCGGAATCGGAGGAAGAAACTAGAGAATCCAGTGATGAATCAAGTATTTAGCTTCAAGAATCACACTGACAACAAAGATAATGAAGATATTGACATTCCAATATATGATTTATCAACCATTGCTAATGCAACCAATAACTTTTCCATTGATAACAAATTGGGGCAAGGAGGATTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCATCGAAATCTAGTGAAGCTACATGGTTGTTGCATTCAAAATGATGAGAAAATCTTGATATATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTTGATCAAATTAGAAAAAGTTCATTGCATTGGACTCGACGGTTTCAAATTATTTGTGGGATTGCTCGAGGACTTCTTTATCTTCATGAAGATTCTAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTTTAGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTGAAGTTGAAACAAATAGAGTAGTAGGAACTCATGGTTACATATCTCCAGAGTATGCAGCACGTGGATTTTTCTCGGTGAAATCTGATGTGTATAGTTTCGGTGTTATTATACTAGAGACTATATCTGGAAAAAGGAACAGGGAATATAGTGACTATCTCAATCTTGACCTTCTTGGATATGCATGGAGAATGTGGTGTGAATCAACGCCGTTGAATCTGATAGATGAATCTCTAAGCGATTCGATTGCTGTAGCTGAACCTGAAATATTGAGATGTATTCAAATAGGGCTTTTATGTGTTCAAGAGAGACCTGATGATAGGCCAGACATGTCAGCTGCAGTTCTAATGCTGAATGGTGAAAAAGCATTGCCTAAGCCAAAGGAACCAGCCTTCTATCCACACCAATTTGGCTCATCATCAGGAACTACTAAGCTGCATTCAAACAATGAAGTTTCTATAACATTGTTAGAAGCAAGATAG 2454 0.3663 MFLMESFKVLVLCFVLFNFIPSFNTLETIVPGQSIKDNETLISKDGTFEAGFFNFGDSNNQYFGVWYKDISPRTVVWIANRDFPLGNSLGVFNVTDKGTLVIVDSKGNMIWSSNTSTIATKPIVQILDSSNLVVKDETKPDKILWQSFDVPGNTLLPGMRIRSNLVNGDYKGLVSWRDTQDPATGLYSYHIDTNGLPQVVITKGNSFYVRIGSWNGNMLTGIPSTTLYTFFNFSFVITEKEVSYGYELLKPSIVSRYMLTSTGQMTRYILSDQTEKWQLFFLGPADSCDNYVICGENSNCDANNSPICECLEGFIPKSQEKWNSQIWSDGCVRRVKLDCDNRDGFLKRMGMKLPDTSKSWFNKSMNLEECEKFCLRNCSCTAYANLDVRDGGSGCILWFNNILDVKKLSAGGQDLYIRVAASELDHNTGINKKLAGILVGCIMFILIMIILGVAIRRNRRKKLENPVMNQVFSFKNHTDNKDNEDIDIPIYDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLHGCCIQNDEKILIYEFMINRSLDYFIFDQIRKSSLHWTRRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAEVETNRVVGTHGYISPEYAARGFFSVKSDVYSFGVIILETISGKRNREYSDYLNLDLLGYAWRMWCESTPLNLIDESLSDSIAVAEPEILRCIQIGLLCVQERPDDRPDMSAAVLMLNGEKALPKPKEPAFYPHQFGSSSGTTKLHSNNEVSITLLEAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1005 817 SMART blect_4 32 151 IPR001480 -
Mal4g1005 817 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1005 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 216 IPR036426 -
Mal4g1005 817 CDD PAN_AP_plant 335 420 - -
Mal4g1005 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Mal4g1005 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 817 - -
Mal4g1005 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mal4g1005 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 817 - -
Mal4g1005 817 CDD B_lectin 33 151 IPR001480 -
Mal4g1005 817 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Mal4g1005 817 Pfam D-mannose binding lectin 74 177 IPR001480 -
Mal4g1005 817 Pfam PAN-like domain 339 405 IPR003609 -
Mal4g1005 817 SMART serkin_6 503 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1005 817 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Mal4g1005 817 Gene3D Hepatocyte Growth Factor 336 417 - -
Mal4g1005 817 SUPERFAMILY Protein kinase-like (PK-like) 488 801 IPR011009 -
Mal4g1005 817 CDD STKc_IRAK 509 777 - -
Mal4g1005 817 Pfam Protein tyrosine and serine/threonine kinase 504 771 IPR001245 GO:0004672|GO:0006468
Mal4g1005 817 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Mal4g1005 817 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Mal4g1005 817 SMART ntp_6 340 419 IPR003609 -
Mal4g1005 817 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Mal4g1005 817 Gene3D - 23 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1005 Mal-Chr4 13749405 13753191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1005 434 792 Receptor kinase-like Gene Family AT4G23190 50.136 3.82e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1005 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1005 - - ccaj:109805721 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1005 4 13749405 13753191 Mal4g1005 4 13749405 13753191 ECH