Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1004 ATGGACAGCATCAAAGTGCTAATTTATTGCTTTCTTCTCTTCCATTTCTTACCAACCTTCAATACCTTGGAAACCATTGTTCCAGGACAATCTCTCAAACATAATGACACTCTAATCTCAACAGATGAAACTTTTGAAGCTGGTTTCTTCAACTTTGGAGATTCAAATATCAATTATTTTGGTGTATGGTACAAGAACATTTCACCAAAAACAATTGTGTGGATAGCAAACAGAGATGTTCCATTAGGAAACTCATCAGGAGTTTTGAATGTCACTGATAAAGGAACTCTTGTTATTGTTGATTCCGAAGGGAATATGATATGGTCCTCTAACACATCAACAACAGCAACAAAACCAATTGTGCAACTCTTGGAAACTGGAAACCTTATTGTGAAAGAGGAAACCAACCAAGATAATATATTGTGGCAAAGTTTTGATCTACCTGGTGATACTTTCCTCCCAGGTATGAGAATTAGAAGCAACTTAGTAAATGGTAATTATAAAGGTTTGGTTTCTTGGAGAGACACACAAGATCCTGCTACTGGTTTATATTCATATCATATAGATACTAATGGTTTTCCTCAAGTAGTGATTACAAAAGGAGACACATTATTCTTTAGAATAGGTTCATGGAATGGAAGAATTTTATCAGGAATTCCTTCTGAGACACTTTACAAAGCCTTTAATTTTTCATTTGTGATTACTGAGAAGGAAATTTCTTATGGATATGAACTTTTGAACAAGTCAATTGTTTCAAGATACTTGGTAACTTCAACCGGTCAAGTAGCGCGTTACATGTTGTCGGATCAGACAAATAGTTGGCAACTTTTCTTTGTTGGCCCTGCAGACAGTTGTGATAATTATGCTATCTGTGGTGCAAATTCTAATTGTGATGTTGATAACTCGCCAGTATGTGAATGTCTTCAAGGTTTCATTCCGAAATCTCAAGCAAATTGGAGTTCACAAAATTGGTTGGATGGTTGTGTTAGGAAAGTGAAGTTGGATTGTGACAACAGGGATGGCTTTTTGAAGCATATGGGAATGAAGTTGCCAGACACATCAAGATCATGGTTTAATAGGAGCATGAACCTTGAAGAATGTAAGAGATTCTGTCTGAGAAACTGTTCTTGCACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGCTGCTTGCTTTGGTTTAATAACCTTTTAGATGTCAGAAAATTAACCTCTGGAGGACAAGACCTTTACATAAGAGTTGCAGCTTCAGTTTCAGAACTAGACCATAACACAGGCTTGAACAAGAAGAAGCTTGCAGGAATTCTAGTGGGCTGTATTATGTTTATTGTGATCATGATAATACTGGGAGTGTCCATACATCGCGTTCGGAGGAAGAAACTAGACAAGCCAGGGAAGAATCAAGCATTTAAATTGAAGAATCACACCGACAACAAAGAGAATGAAGACATTGACATACCGATATTTGATTTATCAACGATAGCTAATGCAACCAATAACTTCTCCATTGATAATAAATTGGGGGAAGGAGGATTTGGACCAGTTTACAAGGGTAAATTGGAAAATCTAAAAGATATAGCTGTGAAGAGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAATGAAGTTAAGCTAATTGCAAATCTTCAGCACAGAAATCTTGTGAAACTACTTGGTTGTTGCATTCATGATGATGAGAGACTCCTGATATACGAATTCATGATCAACAGAAGCTTGGACTTCTTCATTTTTGATCAAACTAGAAAAGGTTTACTACATTGGACTCAAAGATTCCAAATTATTTGTGGGATTGCTCGAGGGCTTCTTTATCTTCATGAAGATTCTAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTAAAGGGGAAACAAGAAGAGTGGTCGGAACTTATGGTTACATATCTCCAGAGTATGCAGCACGTGGACTTTTCTCAGTGAAATCTGATGTATTTAGTTTCGGCGTTATTATACTAGAGACAATTAGTGGAAACAAGAACAGAGAGTATCGTGACTATCATGATCTTGACCTTCTTGGATATGCATGGAGAATGTGGTTTGAAAAGACGCAGTTGGAGCTGATAGACGAATCTCTACGCGAATGGACTGTTGTAGCTGAACCTGAAATGTTGAGATGTATTCAGATAGGGCTTTTATGTGTTCAAGAGAGAGCTGATGATAGGCCAGACATGTCAGGTGTAGTTTTAATGCTGAATGGAGAAAAAGCATTGCCTAATCCAAAGGAACCGGCCTTTTATCCACGCCAATCTGGCTCTTCATCAGGAACTAGTAATCTGCATTCAAACAATGAAGTTTCCATGACATTGTTACAAGGAAGATAG 2454 0.3737 MDSIKVLIYCFLLFHFLPTFNTLETIVPGQSLKHNDTLISTDETFEAGFFNFGDSNINYFGVWYKNISPKTIVWIANRDVPLGNSSGVLNVTDKGTLVIVDSEGNMIWSSNTSTTATKPIVQLLETGNLIVKEETNQDNILWQSFDLPGDTFLPGMRIRSNLVNGNYKGLVSWRDTQDPATGLYSYHIDTNGFPQVVITKGDTLFFRIGSWNGRILSGIPSETLYKAFNFSFVITEKEISYGYELLNKSIVSRYLVTSTGQVARYMLSDQTNSWQLFFVGPADSCDNYAICGANSNCDVDNSPVCECLQGFIPKSQANWSSQNWLDGCVRKVKLDCDNRDGFLKHMGMKLPDTSRSWFNRSMNLEECKRFCLRNCSCTAYANLDIRDGGSGCLLWFNNLLDVRKLTSGGQDLYIRVAASVSELDHNTGLNKKKLAGILVGCIMFIVIMIILGVSIHRVRRKKLDKPGKNQAFKLKNHTDNKENEDIDIPIFDLSTIANATNNFSIDNKLGEGGFGPVYKGKLENLKDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIHDDERLLIYEFMINRSLDFFIFDQTRKGLLHWTQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRVVGTYGYISPEYAARGLFSVKSDVFSFGVIILETISGNKNREYRDYHDLDLLGYAWRMWFEKTQLELIDESLREWTVVAEPEMLRCIQIGLLCVQERADDRPDMSGVVLMLNGEKALPNPKEPAFYPRQSGSSSGTSNLHSNNEVSMTLLQGR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1004 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 817 - -
Mal4g1004 817 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Mal4g1004 817 CDD PAN_AP_plant 332 417 - -
Mal4g1004 817 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Mal4g1004 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Mal4g1004 817 Gene3D Hepatocyte Growth Factor 333 414 - -
Mal4g1004 817 SMART ntp_6 337 416 IPR003609 -
Mal4g1004 817 Pfam PAN-like domain 336 402 IPR003609 -
Mal4g1004 817 SUPERFAMILY Protein kinase-like (PK-like) 485 797 IPR011009 -
Mal4g1004 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 817 - -
Mal4g1004 817 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Mal4g1004 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Mal4g1004 817 MobiDBLite consensus disorder prediction 790 817 - -
Mal4g1004 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mal4g1004 817 Pfam D-mannose binding lectin 71 174 IPR001480 -
Mal4g1004 817 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Mal4g1004 817 SMART blect_4 29 148 IPR001480 -
Mal4g1004 817 CDD B_lectin 30 148 IPR001480 -
Mal4g1004 817 SMART serkin_6 503 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1004 817 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1004 817 CDD STKc_IRAK 509 777 - -
Mal4g1004 817 MobiDBLite consensus disorder prediction 784 817 - -
Mal4g1004 817 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672|GO:0006468
Mal4g1004 817 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Mal4g1004 817 Gene3D - 20 145 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1004 Mal-Chr4 13736114 13740637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1004 428 792 Receptor kinase-like Gene Family AT4G23190 49.326 1.43e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1004 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1004 - - ccaj:109805721 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1004 4 13736114 13740637 Mal4g1004 4 13736114 13740637 ECH
Mal5g2438 5 67264615 67268096 Mal4g1004 4 13736114 13740637 PCT