Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0997 ATGAGACAAGCTGGTGCATATTCAGGTTTACTAAATGGTGGCATAGGAAGAACAGGTCCACATTCATTACCTTTAGCAAGGATAAAGAAGATAATGAAGAATTCTAGTGAAGATGTGAAGATGATTTCAGGGGTGGCTCCAATTGTTTTTTCCAAAGCTTGTGAACTTTTCATTGAAGAACTTACAAGAAGGTCTTGGATTATGGCTATTGATGGTAAAAGAAGAACTTTGAATAAAGAAGATGTTGCTTCTGCTGTTATAGCTACTGATATTTTTGATTTTTTGATCACTTTGGTTTCTAATTCTGATTCTAGTGAAACCACTGTCATGCAAATGGAAACTATCAATTCCTCTTAA 357 0.3473 MRQAGAYSGLLNGGIGRTGPHSLPLARIKKIMKNSSEDVKMISGVAPIVFSKACELFIEELTRRSWIMAIDGKRRTLNKEDVASAVIATDIFDFLITLVSNSDSSETTVMQMETINSS* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0997 118 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 109 - -
Mal4g0997 118 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 22 86 IPR003958 -
Mal4g0997 118 SUPERFAMILY Histone-fold 15 95 IPR009072 GO:0046982
Mal4g0997 118 Gene3D Histone, subunit A 15 101 IPR009072 GO:0046982
Mal4g0997 118 PANTHER HAP5 SUBUNIT OF HAP COMPLEX 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0997 Mal-Chr4 13604332 13604688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0997 21 103 CCAAT-HAP5 Transcription Factor Family AT1G54830 63.855 1.47e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal4g0997 CBFD_NFYB_HMF 8.1e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0997 - - gmx:100777614 189.504