Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0996 ATGAACATTATGTCTTTCATCATAACAAGTATAATTTTCCATGCTTATCATATACTTATATATTTTTCTCAAATTTCTCTAGCATTTGACTCACTTTCTCAAACCATTTCCCTAATAGATGATGGCAACACCTTAGTTTCCAAAGGTGGAATCTATGAACTTGGATTCTTCACTCCAGGAAATTCTAATAAACGTTACCTTGGGATTTGGTACAAGAAAATCCCAATTCAAACAGTGGTTTGGGTTGCAAATAGAGTCAATCCAATCAATGACTCCTCTGGAATATTAACATTAAACATTACAGGAAACCTTGTCCTCACTCAAAATAATGAAACAGTTGCTTGGTCTACAAGAATAAATTCTCTTAGAAAAAAACCAGAGAATCCAGTTGCAATTCTTTTAGATTCTGGCAATCTTGTGATACTAGATGAGAAAGAAGAAAACAAAGAATCATACTTGTGGCAAAGTTTTGATTATCCAACAGACACTTTCTTACCAGAAATGAAATTCGGTTTGGACTTAAGAACCGGTCTTAATCGGCGATTAACTGCTTGGAAGAGTCCTGATGATCCATCACCTGGTGATTTTTCTTTTGGTATGGTGCCACATAACTATCCTGATGCATATATGATGAAGGGTGATAAAAAATTCTACAGAAGTGGACCATGGAATGGTTTGCATTCAAGTGGTTCACCACAGGTTAAGCCTAATCCAATTTATGATTTCAGGTTTGTTTACAATAAGGATGAACTTTACTACACTTATAGCCTCAAAAACTCGTCTGCTGTATCGCGATTAGTACTGAATGGAACCACGTACGTTCGTTACCGTTACGTGTGGATTGAATCGGCGCAAAGATGGGAAACCTACACATCGGTACCGTTGGATTTATGTGACAGTTATGCACTTTGTGGAGCTTATTCAAGTTGTGTTATTTCAGATTCACCTGTGTGTCAATGTATGGAAGGTTTTAAACCTAAGTCGCCTCAAGCGTGGTATTCGATGGATTGGTCTAATGGATGTGTTCGAAATAAGGCATTGCGCTGCGAGGAAAAAAACAAGGATGGGTTTGTGAAATTGAGTGGTATGAAAGGTCCTGATACTACATATAGTTGGCTGAATGAGACAATTGGTTTGGAGGAATGTAGAGTGAAGTGTTTGGATAATTGTTCTTGTATGGCATATGCAAATTCAGATGTAAGAGAAGGGAGTGGATGTGCCTTATGGTTTGGTGATTTAATTGATATTAGACAATTTGCAGCTGGAGGGCAAGACTTATATGTTAGAATGGATGCTACAGAATTAGAAAATGCCAATGAGGGCCACAAGAAGAAAGGAGTGTTGGTGGGAGTAACAGTTTCTCTTGCCATGGCAGCGGTTTTCGGTATACTCATAGTTGCTTGGTGTTATAGACAGAAATCACAAACCAATGTAAAAGATTTCAGTATCAAAGAAGATCATCAAAACAGTGGGATGCAAGTGGATGATGGAGATCTACCAGTTTTTAACTTGTCAACAATAGCAAAAGCCACCAACAACTTTACTATCAGTAACAAAATTGGTGAAGGTGGTTTTGGACCTGTATACAAGGGGATTCTAGCAGATGGAGTGGAAATTGCTGTGAAAAGGCTTTCAACAAGCTCAGGACAAGGATTAAGCGAGTTTAAAAACGAAGTAAAATTGATTGCAAAACTTCAACACCGAAATCTTGTGAAGCTTCTTGGTTGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAATACATGCCTAATAGTAGCTTGGACTCCTTTATTTTTGATAAGCAGAGAAGTGAATTACTAGATTGGTCAAAGCGTTTCGACATCATATGTGGAATTGCTCGGGGACTTGTCTATCTTCATCAGGATTCAAGACTAAGGATTATTCACCGAGATTTAAAAGCCAGTAATGTTTTACTAGATAAGGAATTAAATCCTAAAATTTCAGATTTCGGCATGGCTAGAATTTTCGGAGGAGATCAGAATGAAGGAAACACAAGGAGAATAGTTGGGACATATGGTTACATGGCACCGGAATATGCTACCGATGGTTTATTTTCAGTAAAATCTGATGTCTTCAGCTTCGGTGTTTTGTTGTTGGAGATTATATCAGGGAAGAGAAGCAGAGGATACTATAATCAAAACCAAACCCATAATCTCATAGGCTATGCTTGGAAACTTTGGAAAGAAGGAAGACCAATAAAATTGATTGATAAAAACATTGGAGAATCTTGTTTTATATCACAAATATTGCACTGCATTCATGTTAGTCTCTTGTGTGTTCAACAAAATCCAGAGGATAGGCCTGTAATGTCATCTGTGATCCTAATGTTAGTGAGTGAGTTTGAATTGGCTGAACCAAAACAGCCAGGATTCTTTTTGAAAGATTCAAGTGAAGCAGACTCATCCACTAGTAACCAGCTACTAAGTTCTACAAATGAAATAACCATTACCCTATTGGAAGCTAGATGA 2493 0.3746 MNIMSFIITSIIFHAYHILIYFSQISLAFDSLSQTISLIDDGNTLVSKGGIYELGFFTPGNSNKRYLGIWYKKIPIQTVVWVANRVNPINDSSGILTLNITGNLVLTQNNETVAWSTRINSLRKKPENPVAILLDSGNLVILDEKEENKESYLWQSFDYPTDTFLPEMKFGLDLRTGLNRRLTAWKSPDDPSPGDFSFGMVPHNYPDAYMMKGDKKFYRSGPWNGLHSSGSPQVKPNPIYDFRFVYNKDELYYTYSLKNSSAVSRLVLNGTTYVRYRYVWIESAQRWETYTSVPLDLCDSYALCGAYSSCVISDSPVCQCMEGFKPKSPQAWYSMDWSNGCVRNKALRCEEKNKDGFVKLSGMKGPDTTYSWLNETIGLEECRVKCLDNCSCMAYANSDVREGSGCALWFGDLIDIRQFAAGGQDLYVRMDATELENANEGHKKKGVLVGVTVSLAMAAVFGILIVAWCYRQKSQTNVKDFSIKEDHQNSGMQVDDGDLPVFNLSTIAKATNNFTISNKIGEGGFGPVYKGILADGVEIAVKRLSTSSGQGLSEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMPNSSLDSFIFDKQRSELLDWSKRFDIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMARIFGGDQNEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLLEIISGKRSRGYYNQNQTHNLIGYAWKLWKEGRPIKLIDKNIGESCFISQILHCIHVSLLCVQQNPEDRPVMSSVILMLVSEFELAEPKQPGFFLKDSSEADSSTSNQLLSSTNEITITLLEAR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0996 830 SMART ntp_6 352 430 IPR003609 -
Mal4g0996 830 Gene3D Transferase(Phosphotransferase) domain 1 590 796 - -
Mal4g0996 830 Pfam Protein tyrosine and serine/threonine kinase 515 782 IPR001245 GO:0004672|GO:0006468
Mal4g0996 830 ProSiteProfiles PAN/Apple domain profile. 349 431 IPR003609 -
Mal4g0996 830 SMART serkin_6 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0996 830 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Mal4g0996 830 CDD B_lectin 41 160 IPR001480 -
Mal4g0996 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Mal4g0996 830 Pfam D-mannose binding lectin 78 186 IPR001480 -
Mal4g0996 830 PANTHER - 29 827 - -
Mal4g0996 830 Pfam PAN-like domain 349 416 IPR003609 -
Mal4g0996 830 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0996 830 CDD STKc_IRAK 520 785 - -
Mal4g0996 830 CDD PAN_AP_plant 347 429 - -
Mal4g0996 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Mal4g0996 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 827 - -
Mal4g0996 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 191 IPR036426 -
Mal4g0996 830 SMART blect_4 36 160 IPR001480 -
Mal4g0996 830 Pfam S-locus glycoprotein domain 218 328 IPR000858 GO:0048544
Mal4g0996 830 Gene3D - 28 157 IPR036426 -
Mal4g0996 830 Pfam Domain of unknown function (DUF3403) 789 830 IPR021820 GO:0004674
Mal4g0996 830 SUPERFAMILY Protein kinase-like (PK-like) 496 785 IPR011009 -
Mal4g0996 830 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0996 Mal-Chr4 13597454 13600839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0996 469 830 Receptor kinase-like Gene Family AT4G11530 54.054 6.50e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g0996 PK_Tyr_Ser-Thr 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0996 - - gmx:100778155 1343.18