Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0994 ATGGCTGATGATAATCAATTTCATCATTCAAGTGGAAACTGGTGGGACACAGCATCAAGAAACATGAGATTTGATCATCAAAGTGGAGGAACATCACAATCTTCTTCATCTGCCATAACCAACAACATAGTTGATTTTGCTTGGCAAAATTCAGATATGGTAGAAATAAAACCAAGATCTTCCATGGAAAATTCTTCAGTTGTTTTTCATGATAATCAGAAACTTCAACAACCTCAAGATTCTTCTACTTCATCTGACCCTAACTTGCATATGATGGGTTTGGGCCTTTCTTCTCATGCCATGGATTGGAATCAACCATCTTTGATAGGTGAGAAGGGAACAGAAAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTTGAGCAAGAAAATGTGATGGGGATGTGTCAACAAGTGAATAGAAACAATTTCTCTTTGGATCAAAACCAATTTAGTCCTCAATATAGTTCTGGAGATAGCAATGTGATTACAAGTCAAGGTTTACCATCAAATTTTCAGATTGATTCTTCAGCTTTATATGGAACTCCATCCTCAATTTTACAAGGCTCCTTTGAAAATAGATCCATGAGTAGTGCTTTTCCATATCCAACAAATAACTATGGATTATTAAACTCTAATAATGAGTTGAATATGGCAGCTTCTAATAATTGGTCTAATAAAGTTCCTCAATTTTTGATGAGAACTTCACCTCCAAAACAACCAACCAATAATCAGTTACATTTTACTAACAACACTCCCTTTTGGAATGCTTCTGAGGCTCCTAATTCCATTAAAGATGTTAGGTCTACTTTCTTCCCCTCTTTGCAACCTCAATTCTCCACCCCAAATTTTGATTCACACTCAAAGAATATATCTGAAGTGAGTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCAACTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCACTCCAACAATTAGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATACATCAAATTTCTCCACGAACAAGTTACTGTTTTGAGCACCCCATACATGAAAAGTGGAGCTCCATCAGAGATTCAGCAGAATTCTGGTAAATTAAAAAAATGTGAGGGTGCAAAGCAAGATCTAAAAAGTCGAGGACTATGTTTGGTACCAGTTTCTAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTCGGAGGGACATCAAGATAA 1314 0.3752 MADDNQFHHSSGNWWDTASRNMRFDHQSGGTSQSSSSAITNNIVDFAWQNSDMVEIKPRSSMENSSVVFHDNQKLQQPQDSSTSSDPNLHMMGLGLSSHAMDWNQPSLIGEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNNFSLDQNQFSPQYSSGDSNVITSQGLPSNFQIDSSALYGTPSSILQGSFENRSMSSAFPYPTNNYGLLNSNNELNMAASNNWSNKVPQFLMRTSPPKQPTNNQLHFTNNTPFWNASEAPNSIKDVRSTFFPSLQPQFSTPNFDSHSKNISEVSVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPSEIQQNSGKLKKCEGAKQDLKSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0994 437 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 426 - -
Mal4g0994 437 Gene3D - 327 397 IPR036638 GO:0046983
Mal4g0994 437 MobiDBLite consensus disorder prediction 62 90 - -
Mal4g0994 437 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 32 426 - -
Mal4g0994 437 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Mal4g0994 437 SMART finulus 328 372 IPR011598 GO:0046983
Mal4g0994 437 MobiDBLite consensus disorder prediction 301 321 - -
Mal4g0994 437 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 379 IPR036638 GO:0046983
Mal4g0994 437 CDD bHLH_AtbHLH_like 323 374 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0994 Mal-Chr4 13564194 13568354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0994 252 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.111 5.89e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0994 - - gmx:100796549 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0994 4 13564194 13568354 Mal4g0994 4 13564194 13568354 ECH