Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0991 ATGGAATTGAAATTAAAAGAGCAATTAGAAGCTTTCAAGAGAGAGTTATTAGGAGGTTTCAACATTGTTTTAACTCAGATACACCAATGTTACCCTAAATTAGTTATTCCAACCTTGTTTAGCATTCCAAAGACAAATGATGTGCAAGCTGATCCACATTCTTCTGCTGAGATCAAAGAAGAAATTGCTCATAAAAAGCGACGTGAGAAGGAAATTCAACTTGTGGACAATCTCGCTAATGAGAAGCCGAAGAAACACACAAAGAAGCCTATGGGCCTATGTCCAAGGGGCTCAAAGCATGAAGTCCTTGAAGAGCAACAAGAGAAACCACAAATTTTAGGAAATAAGCGTAAGGTCTCATGGACAAGTGGCTACATGCCTGAAGTCCTTGAAGAGCAACAAGAGAAACACACTAAGAGCAAGTCAAAAGAAAACCAGGCCAAAAAAATCAAAGTTGAGAAGGATGCTAATATGCTTGAGAATCCGCCGACTTCCTTTTTTCTCTTATGGGATAAATTTGGCGAAAATTCTGATGTTAATAAAATGGCTGTTAAAGCATGGAAGTCCATGAGTAATGAAGATAAACAACATTATTTGGATAAAGCAGCTAAGCGCAAGGCAAAACATGAGAAACTTATGAAGAAAGTGCAGTGA 654 0.3792 MELKLKEQLEAFKRELLGGFNIVLTQIHQCYPKLVIPTLFSIPKTNDVQADPHSSAEIKEEIAHKKRREKEIQLVDNLANEKPKKHTKKPMGLCPRGSKHEVLEEQQEKPQILGNKRKVSWTSGYMPEVLEEQQEKHTKSKSKENQAKKIKVEKDANMLENPPTSFFLLWDKFGENSDVNKMAVKAWKSMSNEDKQHYLDKAAKRKAKHEKLMKKVQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0991 217 Gene3D High mobility group box domain 153 217 IPR036910 -
Mal4g0991 217 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 160 217 IPR009071 -
Mal4g0991 217 Pfam HMG (high mobility group) box 176 214 IPR009071 -
Mal4g0991 217 Coils Coil 199 217 - -
Mal4g0991 217 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 126 216 - -
Mal4g0991 217 SUPERFAMILY HMG-box 146 214 IPR036910 -
Mal4g0991 217 CDD HMG-box 176 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0991 Mal-Chr4 13437794 13439323 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal4g0991 HMG_box 1.5e-06 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0991 K25507 - mtr:MTR_8g107350 308.145