Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0986 ATGGACTCGCAGCAACTTTATAGTTACAGTATGACTAATGCAGGATTACCATACATGTCATCTTTTCCATCCTTGCCGAATGGTTTGCTTGGATCTTTGAAAGTTGGCTTTGGAAACTCACCTGATTCACCATTTTCCTCTCATTTTGATTCTGATACTCTTTCTGCATTTAGTGACAGCCACGAGCAACATAACTCGGGAGAAATCCTCTCTGGTATAAGCCCCTCTTATAACTCATCACTTGAAACTAACCATTATATGCAAAGATCGGTCTCATCGATCAACAGTCTCAAAGACAGTCTGCAACTATATTCTGCTAGAAATTCTTTTCTACCAAGTAACCAGAAAATCAGACACGCCTTGTTGGAACTAGAAAATGCTCTTATGGCCCCCGATGATAACGAAGTTACCACATCTAATTCTTCATTGGGTGAGAGCATCAAGGAAACAGCATCCGGCCCGAGATATAGATCATGGAGCAATGAGCACCAAGGGTCACAATATATTCAAAGTCAACCGTCGCATGTTACCAGCAGCAATAGTAGGCAATCAAATGAAGTAGTGCATGTAGAGAAACGACGAAAGTTGGAAGAGGATTCATCTCTACAAGGGTTTCCATCGGGCGATTTGAAGCAATTACTGATTGCATGTGCAAAAGCTATGGCTGAAAACAACACAGAACTTTTTGACCGATTGATAGAAACGGCTAGAAATGCCGTGTCTATCAGCGGGGAGCCAATCCAGAGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCGTCAGGGAATAGCATTTATCATGCTCTTAAGTGCAGAGAGCCTGAAGGCGAAGAATTACTCACTTACATGCAACTGCTTTTCGAAATCTGTCCCTACTTGAAATTCGGTTACATGGCTGCTAATGGAGCCATTGCTGAAGCTTGTAGGAACGAGGATCACATACACATCATAGACTTTCAAATTGCTCAAGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCGGCAAGACCTGGCGGGGCTCCCCACGTGCGGATCACAGGAATCGACGATCCAGTCTCTAAATATGCCCGTGGCAAAGGACTAGAAGTAGTTGGAGAAAGATTGGCCTTGATGTCTAAGAAATTCGGCATACCGGTTGAGTTTCATGGGATTCCTGTTTTTGGTCCTGATGTTACAAGAGACATGCTTGATATCAGACGCGGAGAAGCTTTGGCGGTGAATTTTCCATTGCAACTCCATCACACAGCCGATGAGAGTGTTGATGTGAATAATCCAAGGGATGGACTTTTGAGATTGGTAAAATCTCTTTCTCCAAAGGTGGTCACACTTGTCGAGCAAGAATCAAACACAAACACAACACCTTTCTTCAACAGGTTCATAGAAACTCTAGATTACTACTTGGCAATCTTCGAGTCCATCGATGTCACCCTCCCGAGAAACAGCAAGGAGAGGATTAATGTGGAGCAGCATTGTTTGGCTCGGGATATCGTCAATGTCATTGCATGTGAAGGCAAAGAAAGGGTCGAGCGGCATGAACTGTTCGGTAAGTGGAAGTCTAGGTTGTCGATGGCCGGATTCCGTCAATGTCCTTTGAGTTCCTATGTGAATTCTGTTATAAGAAGCCTTCTGAGATGCTATTCAGTGCATTATACACTAGTTGAGAAAGATGGGGCAATGCTCTTGGGGTGGAAGAACAGAAATTTGATATCTGCTTCAGCTTGGCATTGA 1743 0.4383 MDSQQLYSYSMTNAGLPYMSSFPSLPNGLLGSLKVGFGNSPDSPFSSHFDSDTLSAFSDSHEQHNSGEILSGISPSYNSSLETNHYMQRSVSSINSLKDSLQLYSARNSFLPSNQKIRHALLELENALMAPDDNEVTTSNSSLGESIKETASGPRYRSWSNEHQGSQYIQSQPSHVTSSNSRQSNEVVHVEKRRKLEEDSSLQGFPSGDLKQLLIACAKAMAENNTELFDRLIETARNAVSISGEPIQRLGAYMVEGLVARKEASGNSIYHALKCREPEGEELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGKGLEVVGERLALMSKKFGIPVEFHGIPVFGPDVTRDMLDIRRGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNSKERINVEQHCLARDIVNVIACEGKERVERHELFGKWKSRLSMAGFRQCPLSSYVNSVIRSLLRCYSVHYTLVEKDGAMLLGWKNRNLISASAWH* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0986 580 MobiDBLite consensus disorder prediction 133 185 - -
Mal4g0986 580 MobiDBLite consensus disorder prediction 133 201 - -
Mal4g0986 580 MobiDBLite consensus disorder prediction 186 200 - -
Mal4g0986 580 Pfam GRAS domain family 210 579 IPR005202 -
Mal4g0986 580 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
Mal4g0986 580 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 18 580 - -
Mal4g0986 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 580 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0986 Mal-Chr4 13227530 13229272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0986 201 579 GRAS Transcription Factor Family AT1G50600 62.797 3.67e-176 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0986 GRAS 1.4e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0986 - - gmx:100799073 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0986 4 13227530 13229272 Mal4g0986 4 13227530 13229272 ECH
Mal4g0986 4 13227530 13229272 Mal5g2452 5 67719128 67721122 PCT