Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0928 ATGCAACGAGCAAGTGACCTTCTTGATGGAGTCTCAATTTTTGCTGCGCCGATCTACAATCAAATCATTGAGCATGCACGTTCAGCTATGGAAGAACTGTGGAAGATAGGACTTGCAGAAAAAAATCCTATATGGCAGCAACATAAGGAATATAGGTACGAAATTCTTAATGATAATGAATATTTGAAACATTTTGGACGGGTTGATGCAACGTTAAGGAAGATTGTTAAGATGGTTGAAGTTGGAGAGCTTCAAACTTTACCTAGTTTTGATTCGTGTCGAAGCCAAAATCCAATGTCGACAAAGGAAATTTCTGAACAAGGTTCGCAAATTGAAGCTTCACGAGATATGGCATTGATTAAGATAAGTCCAATTAACCTTGTTGGATTACTTATGGATGTGAATCAATGGTCGACGGCATTTTACAACATTGTCTCAAGAGCAAGGGTTCTAGGAAGCTTTTCAGATGGAATAGAAGGAAGCTATAGTGGGCTATTGCAGCATGTGATAAGTGCAGAATTTCATTTGCCAAGTCCTGCTGTACCGACTCGGGAGTGTTCATTTGCAAGATATTGCAAGCAATTCTATCATAACCAATGGGCTGTTGTTGATGTATCTTTGGAGGACATTTTACCTTCTCCTTCAAATAATTTTCGAAAAAGACCTTCTGGTTGTTTAATTATTGGAATGCCCGATGGAAACTCCAAGGTTATTTGGGTGGAGCATATGGTAGCAGATCATAGTCAATTGAATCCTCTTTTCAAGCCGTTAGTTACCTCCGGTTTGGCTTTTGGTGCAACACGTTGGCTTGCTTCCATTTTCCGACACATTGAGTTGTCTGAATCAGTGAAGACCACAAAACTTATTGCTCGACTTGTTATACATCAAACCGAGAGGACAAATTTCTTGAAATTGGCTGATAGATTGATGAGAAGATTTTGTGCCAATCTGAGTTCCACCATTAGTAATCCATGGAAACGACCAGATCCTTATCCTAATTCACCAGATATTAGAGTTATGCTTGCAAATAATGTGGGTGGTAGTGCAAATAACCCTCTTGGACCATCAGTGGTTTTTTGCACTACTATTTGGCTTAATGTCTCCCCAAATCGATTATTCGACTTTCTTCGGAACCCGAAATCCAGAAACAAGTGGGATAAACTTTCACAAACACTTTCTGTTCAAGAATTCGCATCCATGCTCACGGGCAAACATCCCGAGAATCGTGTTTCTTTGCTGAGAGCAAGTACTTCATCGGACGAGACTGAAATCTTTTACATACAAGAGAGTCGCGCAGATGCAACAGCTTCTTACGTGATGTATGCTCCAATAGACGAGCCATCATTGAAATCTCTTGTACATGGGTCCAACCCAGACGAAATAATTGCCTTTCCATCAGGGTTTGCTATTATCCCAGGAGGATTACCAAGAGATGGTGATAAAGGAAAAGGAAATTCTAGCAATGAAAGTCTTCTAACGATATCATTTAATATCGTTGATAAATCCATCAATGGTACATATATCCCTCCTGAATCAGTTCTAACCATCCATGACCTCATTACAGAAACAGTTACTGCTATAAAAGATGCAGTTTTGTATCATAGTCGACTCAACAATTGGGATCAAGATGAAGTGAGAAACAGATTGGCAGCAGAGTAG 1659 0.3972 MQRASDLLDGVSIFAAPIYNQIIEHARSAMEELWKIGLAEKNPIWQQHKEYRYEILNDNEYLKHFGRVDATLRKIVKMVEVGELQTLPSFDSCRSQNPMSTKEISEQGSQIEASRDMALIKISPINLVGLLMDVNQWSTAFYNIVSRARVLGSFSDGIEGSYSGLLQHVISAEFHLPSPAVPTRECSFARYCKQFYHNQWAVVDVSLEDILPSPSNNFRKRPSGCLIIGMPDGNSKVIWVEHMVADHSQLNPLFKPLVTSGLAFGATRWLASIFRHIELSESVKTTKLIARLVIHQTERTNFLKLADRLMRRFCANLSSTISNPWKRPDPYPNSPDIRVMLANNVGGSANNPLGPSVVFCTTIWLNVSPNRLFDFLRNPKSRNKWDKLSQTLSVQEFASMLTGKHPENRVSLLRASTSSDETEIFYIQESRADATASYVMYAPIDEPSLKSLVHGSNPDEIIAFPSGFAIIPGGLPRDGDKGKGNSSNESLLTISFNIVDKSINGTYIPPESVLTIHDLITETVTAIKDAVLYHSRLNNWDQDEVRNRLAAE* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0928 552 ProSiteProfiles START domain profile. 41 282 IPR002913 GO:0008289
Mal4g0928 552 SMART START_1 68 279 IPR002913 GO:0008289
Mal4g0928 552 CDD START_ArGLABRA2_like 19 278 - -
Mal4g0928 552 Pfam START domain 96 273 IPR002913 GO:0008289
Mal4g0928 552 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 534 IPR042160 -
Mal4g0928 552 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 2 534 - -
Mal4g0928 552 SUPERFAMILY Bet v1-like 298 472 - -
Mal4g0928 552 SUPERFAMILY Bet v1-like 20 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0928 Mal-Chr4 11942003 11945325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0928 1 531 Homeobox Transcription Factor Family AT4G04890 39.706 2.37e-108 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0928 K09338 - jre:108992281 433.335