Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0921 ATGTTGGGTCGTTTATCGTTTTCCAATTTGAGGCAAGAACAAAGAGCTGAAGCTTCCAATTATTCCATGGATTCTTCTAATCACAATCAAAGCTATAAATACGATGTGTTCATCAGTTTTAGAGGTCCTGACACCCGCAACAGTTTTGTTGATCATCTTTATGCTCATCTAACAAGGAAGGGTATTTTTGCCTTCAAGGATGATAAAAGGCTTGAGAAAGGAAAATCTCTTTCACCGCAACTTCTACAAGCAATTCAAAGTTCTCGGATTTCTATTGTTGTCTTCTCTAAAAATTATGCCGATTCAAGTTGGTGTTTGGAAGAGATGGCTACTATTGCTAAATGCCATAAAGAATTGAAACAAACTGTTTTCCCTATTTTCTATAATGTTGATCCTTCTCATGTTAGAACACATAGTGGGGTTTTCAAAGATGCTTACGATTCCCACACTAAGAAGTTCAAACATGACATAATGAAGGTCATTCGATGGCAGCAAACTATGGAGTATATGAGCTATTTGGTTGGATTTGATGTAAGAAATCAGCCAGAGTTTGCAGAGATTGAAAAAATTGTTCAGGCAGTAATAAAAACATTGAATCATAAATTCTCAGGGTTTACCAATGATCTTGTTGGGATCCAACCTCGCATCGAAGAATTAGAAAAGCTTCTAAAATTGAGCTCAGAGGATGACGACTTTCGAGTTCTGGGAATTTGGGGGATGGGTGGAGTAGGAAAGACAACTCATGCTACTGTTTTGTATGATAGAATCTCTTATCAGTTTGATGTTCGTTGTTTTATACATAACACAAGCAAAATTTTTATGGATGGTGGCATTGTTGCTGTACAAAAACAAATTCTTCGTCAAGTTCTAGATGAAAGAAATCTAGACTCATATGATCCTTTGGAAATAGTTGGGATTATGACAAATAGGCTTCACAGTGGTATTAAGGTCCTTCTAGTTCTTGATAACGTTGATCAATTAGAGCAATTGCAGGAATTGGCTATAAATCCTAAATTGCTTTGTCGAGGTAGTAGAATAATCATAACCACAAGGGATGAACATATTCTAAGAGTATATGGGGCAGATAAAGTCCACAAAGTTCCACTGTTGAATAGTAATGATGCCTGTGAACTTTTTTGTAGAAAAGCCTTCAAAGGTGAAGAACAAAGCAGCAACTGTGTTGAGTTGATTCCAGAGGTACTAAAATATACTCAAAATCTTCCATTAGCAATTAGACTAGTGGGTTCTTTCTTGTGTACCCGAGATGCTACCCATTGGAGAGATGCGTTGAATAGATTGAAGAACAATCCAAATAGTAAAATTATGGATGTGCTTCAGATGAGCGTTGATGGACTGCAACATGAGGAGAAGGAAATATTTCTGCATATTGCTTGTTTCTTTAAAGGGGAGAGGGAAGATTTTGTAAAGGGAATTCTAGATGCTTGTGGATTACACCCTCACATTGGAATCCAAAGAATCCTTGAGAAATCTCTCATTACCATAAAAAACCAGGAAATTCATATGCATGATATGTTACAAGAACTGGGGAAGAAAATTGTTCGGCACCAATTTCCCGAAGAGCCAGAATCGTGGAGTAGATTATGGCGATGCGATGATTTCTATCATGTCTTGATGACAGAAAAGGGAACAAACAATGTTAAAGCTATAGTTCTAGATCAAAAGGAAAATTTCTCCAAATGCAGGGCTGAAGGATTTTCAAATATGAGCAGCCTTAGACTTCTCATACTGCATCATAACAACTTTTCAGGAAATCTCATATTTCTTTCGAACAACCTGCGATATCTTTTGTGGCATGGATACCCTTTTACTTCTCTGTCGTCAAGTTTTGAGCCAAACTATCTTGTGGAATTGAATATGCCTGATAGTAGCATCCAACGACTGTGGGAAGGTCCCAAGGATCTTCCTTATTTGAAAAGGATGGATTTGAGCAACTCGAAGTATCTTATAGAGACTCCAGAGTTTTCTTTGACCCCAAAACTTGAGCGGCTCGATTTTACCGGATGCAAAAACTTAATACAGGTCCATCCATCAATTGGACATCTTACACAACTTGTCTTCTTAAGTTTGCAAAACTGTAGCAGCTTGATCAACCTCGATTTTGGCCGTGCATCAAATTTAAATTCTTTGAGAGTTCTACGCCTTTGCGGTTGCACAAAACTTGAAATGACACCAGATTTTACAGGGGCATCAAATCTTGAGTACCTTGATATGGATGGATGTACAAGTTTATCCACAATTCATGAATCCATTGGGGCTCTTGCAAAGCTTAGATTCTTAAGTTTGAGGGATTGCAAAATTCTTGTTGGAATACCCAATAACATCAATACCATGATTTCTCTTGTAACTCTAGATTTATGCGGCTGCTTGAAACTTACAACTCTGCCCCTCGGACGGACTTTCAGTTCTTCTCATCTGGAGTCTTTGATGTTTCTTGATTTAAGCTTTTGCAATCTTCATTTTGTTCCAGCTGATGCTATTGGAGAGCTACATTGTTTAGAAAGGCTAAATCTTCAAGGAAACCAATTTAAATTACTACCTAAAGGTTTCCAAAATCTTGAAAGACTAGCATATATAAACTTATCTCATTGCCATGAACTTCAAAATATTCAGTCTGGGTCTTACAATTATAGAAGTGCTTCTTCGGGGGGACTATATTTTAAAATAGCAGCGGGATCTCGTGATCATAGGTCAGGGTTATATATTTTTGATTGCCCCAAGCTCATGCCCACAATGGAAGTCATGGGATTGTGTTGGTTACGAAGACTACTTGAGATACCCCAAAACTTTCGGTGTGGCTTTGACATTGTTGTTCCTTGGGATTGGACAAACATTGATTTTCAATCCAGTTGTATTCCGAAATGGTTCAATCACCAATTTGACGGTGGTTCAATAGTAAGGATAGTAGATTCTGATGAAGATGCCAAGAAGTTTGGCTTTGTCTTCTCTGTGGCATTTGAGGTAAAATATTGTCCTGTGAATTCTGGTTCTCAACAGGATTCATTTTCCTTGGCACTGCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAGGAACGCTTCGACATGCCACTCAGTTTGGAACTGCACAAAATTGATGGCTCCAAACATCTTTGGTTAATCTATATCTCTCAAGAGCATTGCCATTTTTTAAAAACTGGGGCACATATCACATTTAAAGCATGCCCAGGTTTGATCATAAAGAAATGGGGATTGCGCAAGCTAATCCATGAGAAAATGCCATATTCTCACCCTAGCTTCACGGAACACTTGATGGAATCTGTTGCGCCCCTACTTGTCTTAGATTATGTACAAGAAACCAGCTGCAGGTATGGACCAAAAATCCAGCTTCCCTATAATTGGTTGGTTACTGAGGAGGAAGAAGTTGAGAATTCTCAAGCCAAGTCAAAAGAAATTAATCTTTCTAATCTGGGCCTTTAG 3465 0.381 MLGRLSFSNLRQEQRAEASNYSMDSSNHNQSYKYDVFISFRGPDTRNSFVDHLYAHLTRKGIFAFKDDKRLEKGKSLSPQLLQAIQSSRISIVVFSKNYADSSWCLEEMATIAKCHKELKQTVFPIFYNVDPSHVRTHSGVFKDAYDSHTKKFKHDIMKVIRWQQTMEYMSYLVGFDVRNQPEFAEIEKIVQAVIKTLNHKFSGFTNDLVGIQPRIEELEKLLKLSSEDDDFRVLGIWGMGGVGKTTHATVLYDRISYQFDVRCFIHNTSKIFMDGGIVAVQKQILRQVLDERNLDSYDPLEIVGIMTNRLHSGIKVLLVLDNVDQLEQLQELAINPKLLCRGSRIIITTRDEHILRVYGADKVHKVPLLNSNDACELFCRKAFKGEEQSSNCVELIPEVLKYTQNLPLAIRLVGSFLCTRDATHWRDALNRLKNNPNSKIMDVLQMSVDGLQHEEKEIFLHIACFFKGEREDFVKGILDACGLHPHIGIQRILEKSLITIKNQEIHMHDMLQELGKKIVRHQFPEEPESWSRLWRCDDFYHVLMTEKGTNNVKAIVLDQKENFSKCRAEGFSNMSSLRLLILHHNNFSGNLIFLSNNLRYLLWHGYPFTSLSSSFEPNYLVELNMPDSSIQRLWEGPKDLPYLKRMDLSNSKYLIETPEFSLTPKLERLDFTGCKNLIQVHPSIGHLTQLVFLSLQNCSSLINLDFGRASNLNSLRVLRLCGCTKLEMTPDFTGASNLEYLDMDGCTSLSTIHESIGALAKLRFLSLRDCKILVGIPNNINTMISLVTLDLCGCLKLTTLPLGRTFSSSHLESLMFLDLSFCNLHFVPADAIGELHCLERLNLQGNQFKLLPKGFQNLERLAYINLSHCHELQNIQSGSYNYRSASSGGLYFKIAAGSRDHRSGLYIFDCPKLMPTMEVMGLCWLRRLLEIPQNFRCGFDIVVPWDWTNIDFQSSCIPKWFNHQFDGGSIVRIVDSDEDAKKFGFVFSVAFEVKYCPVNSGSQQDSFSLALPHPFYLSFESEHTEERFDMPLSLELHKIDGSKHLWLIYISQEHCHFLKTGAHITFKACPGLIIKKWGLRKLIHEKMPYSHPSFTEHLMESVAPLLVLDYVQETSCRYGPKIQLPYNWLVTEEEEVENSQAKSKEINLSNLGL* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0921 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 731 801 - -
Mal4g0921 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 26 728 - -
Mal4g0921 1154 ProSiteProfiles TIR domain profile. 32 198 IPR000157 GO:0007165
Mal4g0921 1154 Pfam Leucine rich repeat 814 871 IPR001611 GO:0005515
Mal4g0921 1154 PRINTS Disease resistance protein signature 639 655 - -
Mal4g0921 1154 PRINTS Disease resistance protein signature 234 249 - -
Mal4g0921 1154 PRINTS Disease resistance protein signature 311 325 - -
Mal4g0921 1154 PRINTS Disease resistance protein signature 404 418 - -
Mal4g0921 1154 SUPERFAMILY L domain-like 508 880 - -
Mal4g0921 1154 Gene3D Ribonuclease Inhibitor 550 734 IPR032675 -
Mal4g0921 1154 Gene3D Ribonuclease Inhibitor 735 938 IPR032675 -
Mal4g0921 1154 Gene3D - 369 453 IPR042197 -
Mal4g0921 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 731 801 IPR044974 GO:0006952
Mal4g0921 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 728 IPR044974 GO:0006952
Mal4g0921 1154 Gene3D - 27 199 IPR035897 -
Mal4g0921 1154 Pfam TIR domain 33 202 IPR000157 GO:0007165
Mal4g0921 1154 Gene3D - 200 364 IPR027417 -
Mal4g0921 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 463 IPR027417 -
Mal4g0921 1154 Pfam NB-ARC domain 219 439 IPR002182 GO:0043531
Mal4g0921 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 175 IPR035897 -
Mal4g0921 1154 SMART till_3 33 173 IPR000157 GO:0007165
Mal4g0921 1154 Pfam Leucine Rich Repeat 620 637 IPR011713 -
Mal4g0921 1154 SMART LRR_typ_2 812 835 IPR003591 -
Mal4g0921 1154 SMART LRR_typ_2 836 858 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0921 Mal-Chr4 11882722 11887418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0921 711 880 WRKY Transcription Factor Family AT4G12020 33.918 3.29e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0921 - - var:108332841 1357.81