Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0891 ATGTCAGGAATCGGACCCGTTTCACAAGACTGGGAGCCCGTCGTTCTCCGTAAAAAAGCTCCCACCGCCGCTGCCAGGAAGGATGACAAAGCTGTCAACGCCGCTCGCCGTGCCGGTGCCGATATCGAAACCATGAAGAAACATAATGCTGCGACCAACAAAGCTGCATCTAGCAGCACTTCATTGAACACTAAGAGGCTGGATGAGGATACAGAGAATTTAGCTCATGATCGGGTTCCAACTGAACTCAAGAAAGCTATAATGCAAGCTCGGATGGACAAGAAACTTACTCAGGCACAACTTGCTCAAATTATCAATGAGAAGCCTCAAGTGATCCAGGAGTATGAGTCAGGAAAAGCCATTCCAAATCAGCAGATAATTGGGAAGTTGGAGAGAGCTCTTGGTGCCAAATTGCGTGGGAAGAAATGA 429 0.4802 MSGIGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETMKKHNAATNKAASSSTSLNTKRLDEDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0891 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Mal4g0891 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Mal4g0891 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Mal4g0891 142 SMART mbf_short4 86 141 IPR001387 -
Mal4g0891 142 CDD HTH_XRE 85 135 IPR001387 -
Mal4g0891 142 MobiDBLite consensus disorder prediction 18 74 - -
Mal4g0891 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Mal4g0891 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 138 IPR010982 GO:0003677
Mal4g0891 142 MobiDBLite consensus disorder prediction 21 48 - -
Mal4g0891 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Mal4g0891 142 Gene3D - 71 142 IPR010982 GO:0003677
Mal4g0891 142 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0891 Mal-Chr4 11179386 11182137 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Mal4g0891 MBF1 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0891 K03627 - gmx:100500420 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0891 4 11179386 11182137 Mal4g0891 4 11179386 11182137 ECH