Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0871 ATGGAGAAGGATCATAAGAATGAGGCAACTAAGATGATCAGTTCCACTACTAGTAGTGACGGCGGCACTGGTAGTGATTCTTCAACTATTGATCAAAAAGAAGTTAGTGGAGGTGATAATGTAGCAACGAATCCAGGAAGCGCAAAAATTGAGGAAGATCATCAGAAAGAAGGCGGCGATGATGCAGCAGTGAGTGATTCTTCAACATTGCCATTGCCATTCGATTCTTCAATCAACATAACACCAAAGAAGAGAAAATTAGAATGGATTCTTCTTGCCATTGGAACTTCTGAAACTGAAACAACTTCCGCAGAAACTTCTTCTTCCAAGAAAATATGTGAAAGCCCTCCTGGCAAGTTGCATACCATTACTTTGAAAGCTGGCGAGGACGTGGTGGATGCTATATTCGAACTATCTAAGGAATATGATCATCTTCGGTTTGTTAGTATAATTGCTGTGATCGGTTCTGTATCAGAAGTTGTCCTTCTTGATCCAAACGCTCCTCCTAACACGCTCAAGGGAGCATTTGAGATAAATTCTTTATCTGTATCATGTCTAGCTGATGAAGATGGTCGTCATTGTCGCGAAAAGGCAACATGCTCCGTTGTATTGATCGATGATAAGGGAAAGACTATTGAAAATATCTCCGTGGGATGCCTCATAGCGGCCGGTCCTCTTGGAATTACTGCGGCCACTTTCAAGAAACCAGCTAGAGAAACTTCTGCTGCTCCTGCTATTGGTTTCTATTGGTTAAATAATGATTCTACACTTTCATTGCCATTGGTTTCTTCTCTCAACATGACATCCAATAAGAGAAAAGAAGACCTGAAACTGAAACAACTACTTCTGCTGAAACTTCTTCCAAGAAAAGAAGAGGACGCCCTCCTGGATTTGGTGGACGCTATATACAATCTATCTGAAGCATTTCCTTGTCGATCTGTTGTCATAAATTCTGCGACCGGTTCTGTATCAGAGTTTGGCATTCTTCATCCAAATGGTCCTCCTAACATGCGCCAGGGAATATTTCAGATACTTAAATTTGTTGTAAAATGTCTCGTTGATGATGATGGTCATCATTGTCGAGCAAAGGCAAGGTGTGGAGTTATATTGACCGATGATAATGGAAATACTTTTGGAAGTACTGCTGTGAATTCCCTCAAAGCAGCTGGACCTGTTCAAATTATTGCATCCACTTTCACGACAGACGTCGCTAAGGAATCAGGTGCAAGAATTTTGGCTAATGCTGCGGTTTCTCGAAATGATAATTCAGATTCAGAAAATATTAACGAAGTAGGACAATCGAGTCGCCTTTCACCAACAGCTAAACTTTTGCCACCAACTCCACCGGCTGCAGGTGGAAACATAAACCCCACAACAACAACAACAACAACAACTAGTGCTGCAAATGATCACGACATGAAGTCTTCTTCAGACACTTGTAATTAA 1446 0.4129 MEKDHKNEATKMISSTTSSDGGTGSDSSTIDQKEVSGGDNVATNPGSAKIEEDHQKEGGDDAAVSDSSTLPLPFDSSINITPKKRKLEWILLAIGTSETETTSAETSSSKKICESPPGKLHTITLKAGEDVVDAIFELSKEYDHLRFVSIIAVIGSVSEVVLLDPNAPPNTLKGAFEINSLSVSCLADEDGRHCREKATCSVVLIDDKGKTIENISVGCLIAAGPLGITAATFKKPARETSAAPAIGFYWLNNDSTLSLPLVSSLNMTSNKRKEDLKLKQLLLLKLLPRKEEDALLDLVDAIYNLSEAFPCRSVVINSATGSVSEFGILHPNGPPNMRQGIFQILKFVVKCLVDDDGHHCRAKARCGVILTDDNGNTFGSTAVNSLKAAGPVQIIASTFTTDVAKESGARILANAAVSRNDNSDSENINEVGQSSRLSPTAKLLPPTPPAAGGNINPTTTTTTTTSAANDHDMKSSSDTCN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0871 481 SUPERFAMILY AF0104/ALDC/Ptd012-like 297 403 - -
Mal4g0871 481 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 252 - -
Mal4g0871 481 ProSiteProfiles PPC domain profile profile. 115 254 IPR005175 -
Mal4g0871 481 Pfam Plants and Prokaryotes Conserved (PCC) domain 297 400 IPR005175 -
Mal4g0871 481 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 234 IPR005175 -
Mal4g0871 481 Gene3D - 296 417 - -
Mal4g0871 481 Gene3D - 119 255 - -
Mal4g0871 481 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 297 471 - -
Mal4g0871 481 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 297 471 IPR039605 GO:0003680
Mal4g0871 481 MobiDBLite consensus disorder prediction 453 481 - -
Mal4g0871 481 MobiDBLite consensus disorder prediction 420 441 - -
Mal4g0871 481 MobiDBLite consensus disorder prediction 1 68 - -
Mal4g0871 481 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 121 238 IPR039605 GO:0003680
Mal4g0871 481 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 121 238 - -
Mal4g0871 481 MobiDBLite consensus disorder prediction 420 481 - -
Mal4g0871 481 MobiDBLite consensus disorder prediction 11 43 - -
Mal4g0871 481 CDD DUF296 121 194 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0871 Mal-Chr4 10732295 10734716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0871 121 233 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 31.304 1.02e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0871 - - mtr:MTR_2g084675 202.216