Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0869 ATGAAGCTTCCGCGAAAATCCAAATCAATGGAACCACCACCGATGGCGCCACCATCATCGGAACCACCGAAACAGAGAGGTCGACCGCGGAAACAGAGAAGAAAAGAGAAAGAAACTGTAACCGTTGAAATTAAGAAGCCGATTGTATTGATTGGACGATACGTTTTGAAAGAGTTTTCAAAAGCCGTTGTTCAAATTGGAAAAGTTGTTAGTTACAAAATCGGTTTATACAGAGTCGAGTATGAGAACGGTGAATTTGAGGATTTGGATAGTAGTAAAATTCGTAGAATTCTCATTGAGGATTGCGATTTCAATGACGATTTGATTCTACGGAAGAATGAATTTGATGAATCGTTGTTGAATAAGATTATTGAAGAATCCAAGAATTTGAGTGAATTGAATGTGGAAAATCAAGAGGAATTAATGGATGTTGATTCCTCTGGTGATTCTAGGGATTCATATTCTGATGCTGGGATGCCGGTTGAATTGACCGTGGCGTTAGAATTGCCGCCTCCGGTGGAGTTACCGCCGTCTTCTGGTACTATTGGTGTGCCGGAGAAATATGTTTCGTATCTGTTTTCGGTTTATGGATTTTTAAGATCATTCAGTACTCGATTGTTTCTGAATCCGTTTAGTTTGGATGATTTCGTTGGTGCTCTTAATTGTCGAGTCTCGAATACTTTGATTGATGCTGTTCATAATTCTTTGATGCGTGCTTTGAGACGTCATCTTGAAAATCTTTCAACCGAGGGCTCGAAGATTGCGTCAAGATTGCTCAGGTGCACTGAATGGAGCTTACTTGATACATTGACTTGGCCTGTTTTCTTAATTGAATATTTAGCAGTTAATGGATACATTAAGGGGTCTGAGTGGAAAGGATTCTATGACGAGGTTTTTAACGGCGATTATTATTCATTGCCTGCAAGTAGAAAGTTAGTAATATTGCAAATTCTCTGCGAGGATGTTTTGGAGTCGGAGGAGCTTAAAGCTGAAATGAACATGCGTGAAGAGTCAGAGGTTGGGAAGAATTATGATGCTGAGGACATTCCTCCTGCAGAAAATGGACCGAAAAGAGTCCATCGACGATATGCCAAAACTGCTGATTGCCAGGATGAAGAATCTACACAGTTTGTTTCAAAATTAGATGCTGTGAACTTACCTGGTAATTCTGCGGACGGGGTTGATAAGAATGGAGATGAATGTCGTCTCTGTGGCATGGATGGGATCTTGCTTTGTTGTGATGGATGTCCCGCTGCTTATCATTCAAGGTGTATTGGTGTGATGAAGATGTATATACCACAAGGGACATGGCATTGTCCAGAATGCAAAATAAATATGATTGGGCCAACAATTGCACGTGGAACATCTCTTAAAGGGGCTGAAACATTTGGAAATGATTTGTACGGGCAACTTTTCATGGGTACTTGCGACCACTTACTTGTGCTCAATGTCAACAGCGCCGAGTTTTGTCTTAAATACTATAATCAGAATGACATTCGTGAAGTTATCCGAGTGCTTTATGCTTCTGTGCAACATAGACATGTATACTCTGGTATTTGTAAGGCGATGTTACAATATTGGAATATTGCAGAAAGCTCTTTGCACCTTTGTGTTCCAGACGGAACACATCTAAACTCAAAAAGTTTGAATATGGTTGAAAATGACCATAAAGGTGTTAGCTTGGGTAAAGCAGAATATGGTCCAGATTCTGTTGTTTCGACTGTTAACCACCAGTCTGACATGAGTTGCCCAAATCCTGATAACAGGTCAACTGCAGCTATTCCTTCCAAGTGCTCGTTGGTAAGCAACCAATTTATTAATTATGGGCATGCAAATGACACTAGTTTGCCTTTGCAAACTAACCGTTTGCCTTTGCAAACTAACCGTGACCAAACTGGCGTTGGAAAGTGCAAAGGAAATATAACTAGTGATTTTGTGTATATGGGTTGCTCCTATAAACCTCAGTCATACATTAATAACTATATGCATGGTGATTTTGCTGCATCTGCTGCTGCTAATTTGGCCATTCTTTCTTCAGAGGATTCTAGATCAGAGGGTCACGTGTCTGACTTGAGGAAAGCTACACCTGAAAACACTAACTTGGTAGCAAAAGCATTCTCACTAACAGCTTCGCGCTTCTTTTGGCCAAGTTCTGACAAGAAACTTGGGGAGGTTATAAGAGAGAGGTGTAACTGGTGCCTTTCTTGTAAATCCCTTGTTTCAAGCAAGAAAGGGTGCATGTTAAATCATGCTGCTATATGTGCTACCAAAAGCGCCGGGAAAATACTTTCTGGTCTTGCTCCTGTAAGGAGTGGAGAAGGAATCAGCTCTACCATTGCAACATATGTCATGTATATGGAGGAAAGCTTACATGGTTTAGTAGATGGGCCCTTTCTTAGCGAAAACTATAGAAAGCAATGGCGTGAACAAGTGGAAAGGGCCACATCATTTAGTAACATAAAGCCCCTTTTACTTAAACTTGAGGAGAACATTCGCACAATTGCTTTTTGTGGCGACTGGGTGAAGCTGATGGATGGGTGGTTGGTTGAATCTCTCACAATCCAAAGTGTTACATCTACTCTTGGAACAACACAGGAACGTGCACCATGCGACAGATGTAGAAAACAATTACCTATCAAATATACAGTCGACAAATGCCGTGAAAACTTTTGCTGGTGGAATGGCAAATTTACCAAATCTGTATTTCAGAAAGCTGCATTGCCAAAATTCATGGTCAGAAAAGCAGCTCGGCAAGGTGGTTTGAGGAAAATATTAGGTATTGTCTATCCTGATGTCTCTGAAATTCCTAAAAGAAGCCGACAGCTGGTTTGGAGAGCTGCCGTTGAAATGAGTAGAAATGCATCACAGCTTGCACTTCAGGTTCGATATCTAGATTTTTACATCAGATGGATTGATCTTATTCGGCCGGAGTATAACCTCCAGGATGGAAAAGGTCAAGATACTGAAGTTTCTGCTTTTAGAAATGCAAATATTTGTGACAAAAAGTTTGCAAAGGGAAAAACATCCTATGCTATAGCTTTTGGGAGCCAAAAGCATATTCCTTCTCGGGTAAGGAAGATTGCTGAAATAGAAGGAGACAAGTTATGGTTTTCTGAAACACGCATTCCTTTATATTTGGTAAAAGAGTATGAAGTAAGAAACAAAAAAGAGCCATATCATAAAGATAACTTGAATATTGCATCTCAATGGCACAAAAGGCGGTTGAATGCTATCTTCAAGGACATATTTTCTTACCTCACGTGCAAGAGAGACAATTTGGACATGTTATCATGTTCTGTATGTAAGCAGTGTGTTTCATTTAGGAATGTTCTCAAGTGCAGTGCATGTCAAGGTCATTGTCACGAGGGCTGTTCAATAAATTCAACATTCTCTACATATACAGATGTTGACTTCTTGACCACATGCAAACAATGCTATCATACCAAATTACTTACTCAAAAAGAGACCAGTAACAAATCTCCAATCAGTCCCTTACTTTTAAAAGGGCGCTCTTTGACAATTTTGAAGGGACCAGCGCCTAAATGTGATGATCAAATACCGAAATCTACCTGGGAAAATAATTGTCGTCCTGACATGAAAAAAGTTGCTACCCATTCCCCTCTTGAAACAAAAAGTAGTTGCAGAAAATCCCCTCTGGAAACAAAAAGCAGCAGCAAAAAATCCTCTTGGGGTATTATATGGAAAAAGAATAACAATGAAGATACAGGCTTTGATTTCAGGCTAAAAAAAGTACTTATGAAGCGACGTTCAAGCTTTCCTCAATTGGAACCTATTTGTCACTTGTGTCATAAGCCATATAGGTCTGATCTAATGTATATAGGCTGTGAAACATGTACCCGGTGGTATCATGCTGAAGCTCTAGAACTTGAAGAGTCCAAAATATTTTCTATGCTGGGCTTCAAATGTTGCAGGTGTCGCAAGATAAAGTCGCCTGTGTGTCCTTACTCTGATTTGGTGTGCAAAGAGCAAGTCGTAGAGAAGTCACGCTCACGGGCTTCCAAGACAAAGCGTTCTGGAGCAGATTCTTGTTCTGAAACACTAGCTGACGTTAGAACAAGTGAGCCTGCTACTCCAATTGTTCCCGTAGAGGCTGTTTCTAAACAAGAGAACACTCCTCTTCTGTTTTCTCTTTCAAATGTCGAGCTGATTTCAGAACCCAAGTTAGATGACATTAGTGCAAGTGAGCCTGTTACTCCAATTTTTCCCGTAGAGGCTGTTTCTAAACAAGAGAACATTCCGCTTCCGTTTTCTCTTTCAAATGTTGAACTGATTACAAAAGCCAAGTTAGAGTTAGATACAGAGAAGTCATACTCACAGTCTTCCAAGAAAAACCATTTTGGAGCAGATTCTGGCTCTGGAACACTGGCTGACACAAGAGCAAGTGAGCCTGCTACTCCTATCTTTCCTGCAGAAGATGTTTCTAAACCAGATAACGATCCTCTGCCGTTTTCTCTTTCAAATGTCAAACTGATTACAGAATCCGAGTTAGATGCAGGCATTGAGCGTAACACCGTCTCTGGGTCAGGGATTCAGAAAATACCAACAAGGCATTTGGGGGACAGTCTTCCTGAGGGGGACAGTAATGGCTCTTTTGGGGGTGAAGTTCGGCATGCTAAAATTTCAACACAGGGTGAAATGGGTAATCTGCCTGCTGAGGTTTTATCACCTTTTGTAGAACATGACTTTGTCTTCGCAGACTGCAATCTTCTGAGTGACTTTGAAATTGTTGATAATGAATACATGGACTTTGAATCCGACACCCATTTCTCTTCATCTGAATTTCTACATCTAGATGGTAGTAGTCACTTTGAGGAAGCTGATGCGTTTGGGGACTTATCTGGATTTGTAAAAAAATCTTGTACACTAAGTGTTCCTGAAGATTGTAGCTTACAGAACAACTGGGCGCCTACAATTTCGTCAAATGGAAATGTTCATAATTGTTGGCAATGTTCACAAACAGAACCGGCCCCCGATCTCTCTTGTCAGATTTGTCGGATGTGGATTCACAGCAAGTGTTCACCCTGGATTGAATCACCATCTAGGCTTGGAGATTGGAAGTGCGGTAATTGCAGGGAATGGCAGTAG 5106 0.4076 MKLPRKSKSMEPPPMAPPSSEPPKQRGRPRKQRRKEKETVTVEIKKPIVLIGRYVLKEFSKAVVQIGKVVSYKIGLYRVEYENGEFEDLDSSKIRRILIEDCDFNDDLILRKNEFDESLLNKIIEESKNLSELNVENQEELMDVDSSGDSRDSYSDAGMPVELTVALELPPPVELPPSSGTIGVPEKYVSYLFSVYGFLRSFSTRLFLNPFSLDDFVGALNCRVSNTLIDAVHNSLMRALRRHLENLSTEGSKIASRLLRCTEWSLLDTLTWPVFLIEYLAVNGYIKGSEWKGFYDEVFNGDYYSLPASRKLVILQILCEDVLESEELKAEMNMREESEVGKNYDAEDIPPAENGPKRVHRRYAKTADCQDEESTQFVSKLDAVNLPGNSADGVDKNGDECRLCGMDGILLCCDGCPAAYHSRCIGVMKMYIPQGTWHCPECKINMIGPTIARGTSLKGAETFGNDLYGQLFMGTCDHLLVLNVNSAEFCLKYYNQNDIREVIRVLYASVQHRHVYSGICKAMLQYWNIAESSLHLCVPDGTHLNSKSLNMVENDHKGVSLGKAEYGPDSVVSTVNHQSDMSCPNPDNRSTAAIPSKCSLVSNQFINYGHANDTSLPLQTNRLPLQTNRDQTGVGKCKGNITSDFVYMGCSYKPQSYINNYMHGDFAASAAANLAILSSEDSRSEGHVSDLRKATPENTNLVAKAFSLTASRFFWPSSDKKLGEVIRERCNWCLSCKSLVSSKKGCMLNHAAICATKSAGKILSGLAPVRSGEGISSTIATYVMYMEESLHGLVDGPFLSENYRKQWREQVERATSFSNIKPLLLKLEENIRTIAFCGDWVKLMDGWLVESLTIQSVTSTLGTTQERAPCDRCRKQLPIKYTVDKCRENFCWWNGKFTKSVFQKAALPKFMVRKAARQGGLRKILGIVYPDVSEIPKRSRQLVWRAAVEMSRNASQLALQVRYLDFYIRWIDLIRPEYNLQDGKGQDTEVSAFRNANICDKKFAKGKTSYAIAFGSQKHIPSRVRKIAEIEGDKLWFSETRIPLYLVKEYEVRNKKEPYHKDNLNIASQWHKRRLNAIFKDIFSYLTCKRDNLDMLSCSVCKQCVSFRNVLKCSACQGHCHEGCSINSTFSTYTDVDFLTTCKQCYHTKLLTQKETSNKSPISPLLLKGRSLTILKGPAPKCDDQIPKSTWENNCRPDMKKVATHSPLETKSSCRKSPLETKSSSKKSSWGIIWKKNNNEDTGFDFRLKKVLMKRRSSFPQLEPICHLCHKPYRSDLMYIGCETCTRWYHAEALELEESKIFSMLGFKCCRCRKIKSPVCPYSDLVCKEQVVEKSRSRASKTKRSGADSCSETLADVRTSEPATPIVPVEAVSKQENTPLLFSLSNVELISEPKLDDISASEPVTPIFPVEAVSKQENIPLPFSLSNVELITKAKLELDTEKSYSQSSKKNHFGADSGSGTLADTRASEPATPIFPAEDVSKPDNDPLPFSLSNVKLITESELDAGIERNTVSGSGIQKIPTRHLGDSLPEGDSNGSFGGEVRHAKISTQGEMGNLPAEVLSPFVEHDFVFADCNLLSDFEIVDNEYMDFESDTHFSSSEFLHLDGSSHFEEADAFGDLSGFVKKSCTLSVPEDCSLQNNWAPTISSNGNVHNCWQCSQTEPAPDLSCQICRMWIHSKCSPWIESPSRLGDWKCGNCREWQ* 1702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0869 1701 MobiDBLite consensus disorder prediction 1442 1467 - -
Mal4g0869 1701 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 290 333 IPR028942 -
Mal4g0869 1701 ProSitePatterns Zinc finger PHD-type signature. 401 442 IPR019786 -
Mal4g0869 1701 PANTHER PHD FINGER FAMILY PROTEIN 1439 1698 - -
Mal4g0869 1701 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 22 1381 - -
Mal4g0869 1701 SMART PHD_3 1265 1313 IPR001965 -
Mal4g0869 1701 SMART PHD_3 1653 1698 IPR001965 -
Mal4g0869 1701 SMART PHD_3 400 443 IPR001965 -
Mal4g0869 1701 SMART PHD_3 1097 1146 IPR001965 -
Mal4g0869 1701 CDD PHD_SF 1654 1697 - -
Mal4g0869 1701 SUPERFAMILY FYVE/PHD zinc finger 1645 1698 IPR011011 -
Mal4g0869 1701 SUPERFAMILY FYVE/PHD zinc finger 387 446 IPR011011 -
Mal4g0869 1701 CDD PHD_SF 1265 1312 - -
Mal4g0869 1701 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1261 1319 IPR013083 -
Mal4g0869 1701 SUPERFAMILY FYVE/PHD zinc finger 1263 1319 IPR011011 -
Mal4g0869 1701 ProSiteProfiles DDT domain profile. 186 246 IPR018501 -
Mal4g0869 1701 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 1439 1698 - -
Mal4g0869 1701 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 392 447 IPR013083 -
Mal4g0869 1701 SMART testlast3 186 246 IPR018501 -
Mal4g0869 1701 PANTHER PHD FINGER FAMILY PROTEIN 22 1381 - -
Mal4g0869 1701 ProSiteProfiles Zinc finger PHD-type profile. 398 445 IPR019787 -
Mal4g0869 1701 MobiDBLite consensus disorder prediction 1206 1224 - -
Mal4g0869 1701 MobiDBLite consensus disorder prediction 1 39 - -
Mal4g0869 1701 MobiDBLite consensus disorder prediction 1203 1224 - -
Mal4g0869 1701 Pfam DDT domain 189 243 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0869 Mal-Chr4 10708473 10715872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0869 1445 1701 PHD Transcription Factor Family AT5G35210 32.453 3.90e-25 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mal4g0869 DDT 3.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0869 - - mtr:MTR_2g084620 2442.15