LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal4g0862	ATGGCGGAGGACCGCAAAGATGCGAGTGATTACAGTTCGGAAGATGAAGGAATTGAGGATTACAAACGCGGTGGATATCATGCTGTTCAGATTGGTGACACGTTCAAAAATGGGTGCTATGTTGTTCAGAGTAAACTTGGTTGGGGTCATTTTTCCACTGTTTGGCTCGCTTGGGATACTCTCAAATTGCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCACTACACGGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCTAGAGGATAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCAAATGGCCAGCATGTTTGCATGGTTTTTGAATTTCTTGGTGATAATCTTCTCACACTTATCAAATATAGTGATTATCGAGGTGTTCCTCTTCCCATGGTCAAAGAAATTTGTTACCATGTTTTGGTGGGTTTGGATTATTTGCATCGTGAACTTTCTATAATACACACTGATTTGAAGCCAGAAAATGTACTGCTCTGCTCTCCAATAGATCCATCTAAAGATCCTAAAAAATCAGGAGTCCCACTTATACTTCCAACTACTAAAGTCAAGACTGTGTCCAAGAACGGGAGTGCAAAAGTTGATAAAAGTTCAAATGCAGATCTAACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAAGCAGCTCAGAAGGAAAGTCCTGAGGAAGCAGAGGAGGATTCTGAAGCTCAGGAGCTAGATAACTGCAGTAATGATGTGAAACCAAATGTAGAAAATGGTGATGGTGAAGGCAAACCTAATGGTTCCACAAGTAAACATGAATCAGAAAATACTTCTGAAACTAAGGATGTTCCACAAGGAAGTCAAGTTTCTAGGAGAGGTAGCCGCTCTACCAGAAAGAAATTGCTTGAAGCTGTTGACCTTAAGTGCAAGCTGGTGGATTTTGGTAATGCTTGTTGGACGTATAAACAATTTACAAACGATATTCAGACAAGGCAGTATAGATGTCCTGAGGTTCTTCTAGGTTCTAAATACTCGACTCCGGCAGATATGTGGTCATTTGCTTGCATTTGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCATAGTGGTGATAACTATGACAGGGATGAGGATCATCTGGCGTTGATGATGGAGCTTCTTGGAATGATGCCTCACAAGATTGCACTTGGTGGCCGCTATTCCCGGGACTTTTTCAATAGAAATGGTGATTTGAGGCACATTCGCCGGTTGCGATTATGGCCTATTACTAAGGTGCTGACGGAGAAGTATGATTTCAGTGAGCAAGAAGCAAGTGACATGGCTGACTTCCTTGTTCCATTACTTGACTTTGTTCCTGATAAGAGGCCAACAGCTGCTCAGTGCCTTACTCATCCATGGATGAGTGCAGGTCCTGGGACTCGTGAGCCCTCTTTGACTAACATACAACCTGATGCTATTAACGGAGAAAAGTCAATAAAGTTGAGGGAAAAGGACGAGCAGGAGGCCATGGAAGTTAGTATGGGGAATATGGCCATTGATGGAACTCCAAAATCACGCAAAGATTTTCAATCTGCGAAGCCATCGGAATAG	1626	0.4219	MAEDRKDASDYSSEDEGIEDYKRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTLKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLCSPIDPSKDPKKSGVPLILPTTKVKTVSKNGSAKVDKSSNADLTKNQKKKMRKKAKKAAQKESPEEAEEDSEAQELDNCSNDVKPNVENGDGEGKPNGSTSKHESENTSETKDVPQGSQVSRRGSRSTRKKLLEAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPHKIALGGRYSRDFFNRNGDLRHIRRLRLWPITKVLTEKYDFSEQEASDMADFLVPLLDFVPDKRPTAAQCLTHPWMSAGPGTREPSLTNIQPDAINGEKSIKLREKDEQEAMEVSMGNMAIDGTPKSRKDFQSAKPSE*	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal4g0862	541	MobiDBLite	consensus disorder prediction	205	307	-	-
	Mal4g0862	541	Coils	Coil	220	240	-	-
	Mal4g0862	541	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	167	179	IPR008271	GO:0004672\|GO:0006468
	Mal4g0862	541	ProSiteProfiles	Protein kinase domain profile.	40	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal4g0862	541	PANTHER	SERINE KINASE-LIKE PROTEIN	8	538	-	-
	Mal4g0862	541	MobiDBLite	consensus disorder prediction	205	219	-	-
	Mal4g0862	541	SUPERFAMILY	Protein kinase-like (PK-like)	35	483	IPR011009	-
	Mal4g0862	541	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	8	538	-	-
	Mal4g0862	541	SMART	serkin_6	40	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal4g0862	541	MobiDBLite	consensus disorder prediction	519	541	-	-
	Mal4g0862	541	Gene3D	Transferase(Phosphotransferase) domain 1	123	480	-	-
	Mal4g0862	541	CDD	STKc_SRPK	29	479	-	-
	Mal4g0862	541	ProSitePatterns	Protein kinases ATP-binding region signature.	46	69	IPR017441	GO:0005524
	Mal4g0862	541	Gene3D	Phosphorylase Kinase; domain 1	16	122	-	-
	Mal4g0862	541	Pfam	Protein kinase domain	40	179	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal4g0862	541	Pfam	Protein kinase domain	316	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal4g0862	Mal-Chr4	10581007	10584394	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal4g0862	7	538	EF-hand Containing Proteins	AT5G22840	69.485	0.0	743

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_SRPK	Mal4g0862		Pkinase	6.6e-21	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal4g0862	K08832		-	gmx:100809984	863.603