Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal4g0855 | ATGATGTCCGTGCCATGGCTGGAAAAACTGTTGGCAATTACTTCATTTTTCAAAGCATGTGAAGTCCATCAAAACGAGTCAAAAAATGAGCGTAACAAGTTTTGCCTCGATTGCAATGACAATCCATTTTGTGGATCTTGCATTGAATCTTGTCACAAAGATCATCGAGTGATCCAAATAAGGAGATCATCTTATAATGAAGCCGTTAAGACCACTGAGATCTACAAGCTTGTCGACATCCTGGGAATTCAAACCTATGTCATTAATAGTTTTACAGTTGTATTTATAAACAAGAGAGCTCATCCCCAACCTAAGAGGTATAAGGTCGGTAAAATTGGTTGCAGCAGCGATTATCTGTGTAAGATATGCAATAGAAACCTCCTGGACTCTACTCACTTTTGCTCTTTAGCATGCAAGTTTGCATATATGAAAAAGAATGGAGGCTTTTTCACAAGTGCAAAGGAGATGGAAGAAATGGAAAGATTATTGGAGAAAGCAATCAAGGTATCACCACCAAAAGAAAAAGCTAAAAAATCGCGTGAACAAAATCAAAAACGAAAGGTAGAAGAAGCGGAAATTGATGAAGAAAATGAAGAGGGCGGGGATGAGGAAGAAGAAGACAAAGAAGAAAAGATGGAAGAAAAAGAAAAAGGGGATGATGATAAAGATAGTATGCTTCACGTTATTCGTCATTTGACTTCATTCCGTAATCCAAATTCAAGAAGAAAGATAATACCTCAAAGGGCACCATTTTTTTAA | 759 | 0.3715 | MMSVPWLEKLLAITSFFKACEVHQNESKNERNKFCLDCNDNPFCGSCIESCHKDHRVIQIRRSSYNEAVKTTEIYKLVDILGIQTYVINSFTVVFINKRAHPQPKRYKVGKIGCSSDYLCKICNRNLLDSTHFCSLACKFAYMKKNGGFFTSAKEMEEMERLLEKAIKVSPPKEKAKKSREQNQKRKVEEAEIDEENEEGGDEEEEDKEEKMEEKEKGDDDKDSMLHVIRHLTSFRNPNSRRKIIPQRAPFF* | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal4g0855 | 252 | MobiDBLite | consensus disorder prediction | 167 | 192 | - | - | |
| Mal4g0855 | 252 | MobiDBLite | consensus disorder prediction | 193 | 210 | - | - | |
| Mal4g0855 | 252 | SUPERFAMILY | B-box zinc-binding domain | 19 | 63 | - | - | |
| Mal4g0855 | 252 | MobiDBLite | consensus disorder prediction | 211 | 229 | - | - | |
| Mal4g0855 | 252 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 251 | - | - | |
| Mal4g0855 | 252 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 251 | - | - | |
| Mal4g0855 | 252 | Coils | Coil | 178 | 206 | - | - | |
| Mal4g0855 | 252 | MobiDBLite | consensus disorder prediction | 167 | 252 | - | - | |
| Mal4g0855 | 252 | Pfam | PLATZ transcription factor | 61 | 139 | IPR006734 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal4g0855 | Mal-Chr4 | 10373834 | 10375465 | Dispersed/Proximal |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | PLATZ | Mal4g0855 | PLATZ | 3.3e-22 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal4g0855 | - | - | cam:101499108 | 293.893 |