Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0849 ATGGCCGTTGCTGGAGTGCACAATGCAGCTGTGTTGGAGTCTAATTTCCTGAGGGAGTCTCATTCTGTGTCACCACGGAGGCAAGAGGATGGAGGAAGGGGAGGTGGACGGCCGTCTTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAGCATGCGGTGAGACAGGTTCAAGGAAGATCTGATGAAGTACTAGTTCAACAAAGGAGTGGTGGATTGGTTGTAGACCCATCACAGCAAGAAACGGACAATAGGACAGAAGATGCAGTTTTGGGTGAGAATGAATCTGAAACATGGTCACAGTCACAGAGTCAGAATGGGTCTCAATATGAACAGGATCAGGAGGAGTTGAACAATTCTAGTCGTGAAAACTCTGCGGATATTGGAGAGGTTGGGAGGGAAAGAGTGAGGAAAATTTTCAGGGGATGGATGAGTAGTGGTGGTTCTAGAGATCTTGCATCAAATATTAACCGAGGAAACAATGGTTCGAGGAGTGGATTTCTTGGGGGAACTGAGCAGGAAAGAGTGAGTGTCGTAAGGGAATGGGTAGAGACGAGTAGCCAGCTGAGAGGTGTTTCTGTTGGGGAAAATAGGGAAGAACAAATTGAATGTGTTCGTGATGGATTGGCTGTCAATCAGATTGAAGGCCAAAGTGAGCATATATCACGAAGAAGAATCCGTAAATTACGTGGTCGGCAGGTTTTGCTTGATATGGTTAAGAAGGCTGAGATGGAAAGGCAAAGAGAAGTTCAGGAATTGTTGGAACGTCGGGCTGTATCTCATTTTCCCCATCGCAATCGCATTCAGGCCTTGCTTAGAGGCAGGTTTTTGAGAAATGATAGACCCATTGATAATAACCGGTCCACTTCCATTGCAGAAAGTGAATTAGGTTTATTGAGACAAAAACAGACTGTATCATGTCTAAGGGAAGGGTTTTCTTTTAGAAAAGACAATTTAGCTTATGGTCAAGCAGCAAGCAACATATCTGATACCTCATCTGACAGTGATATTGATGTCGATAGAATTGAACAAACTGGAGCTACAAGTTCACAAGTAGTCGCCTCTGTACATTCTGAACAGTCAAAGCCTAATAATAAGACAAGTGAGAGACTTGGGATATCATGTGCTCATGAAGAAGAGGAAACAAAAAATTGGGAGTCGTCTTCCAATATCAGTGTTGAAAGAAGAGATGGCACTGCACAAAATGGTAATACAATGCCAACCGAAGATACTGGCAACGACCTTACCCAACAAAGTTTGCAAATTGAAGTTACGGAGCATAGCAATATGCAAGAACAAGAACCAAGTGAGATACATATTGAGGAGTTTCTGCTGGGTGATATAACCGGTGAAGAAAGCAATTTATCAAATCACAACAATCGTGTAGGGGGCAATATCATTGATAATGTAGATTTGGTTGAATCTGTTGCTCTGGAAAGAGAGCAACATGAAGAAATTATTATTGAAAATGAAGGAAGTGACTGGCATCAAACTAACGTTGAGTGGAGAGATAGTACTCAGGAAAGTGTGGATGATAATCAGCTCAGTAGCACATCAAATGAATGGCCCCAAGACATCTTGGGAAATGATGGAGAAAATTCTCATCTGCAAGAGCAAGTAGCAGCCTCTGAAGTTTGGCAAGAAGATGGCAGCTTTCAAGAGGCCGTGGAAATTTGGTTGGGAGGACCTTCTGATAATGGAGCAGCCCCAGTTGGTAGAATTCATGGATTCTATTTTCCAGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTGCTTAGTAGGAGAAGTGTCTCAAATCTCCTACGCAGCAGTTTTCGTGAAAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCACACGTTGAGTGGGAGCTGCAAGAAACAACCCCTTCTTCTTCCTCAACAGAACAAGACCTGGAGCAGCAGAGAAGGGATCAGATTGTTGATACAGAGGACATTGTCAATAGTTCACTTAACCTGCCTTTACCACCACCTCCTCCCCCTTTGCCTCTATGGGATCGACACTCACGTCATGACAATTGGTCACAAAATGGCATAAATAATCAGCGCCGAGGAACTGTGCATTCATTTGCAGGACACAGCCGCTTTCCCTTAGCTGATGACTTGGATAGTATTAGTGACTTGAGAATTGACATGGTTAGGCTACAGCAAAGGATGAATAATATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAACGTTCAATAAGACAAGAAGTCTCAGCAGCCCTTAATCGCTCAACTGGTTCATCAGGAGTACATGACCATGTTTCACCAGACGAATCTAAATGGGAATGTGTGAGGAAAGGACTTTGCTGTATATGCTGTGAAGGCAATATTGATTGCTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCAAATCAATTGCTTGATAGTAGAAGAAAGTGTCCAATGTGTCGAGCACCAGTGGTGGAAGTGATACGTGCTTATTCTATATAA 2523 0.4324 MAVAGVHNAAVLESNFLRESHSVSPRRQEDGGRGGGRPSSLLQMWREIEDEHAVRQVQGRSDEVLVQQRSGGLVVDPSQQETDNRTEDAVLGENESETWSQSQSQNGSQYEQDQEELNNSSRENSADIGEVGRERVRKIFRGWMSSGGSRDLASNINRGNNGSRSGFLGGTEQERVSVVREWVETSSQLRGVSVGENREEQIECVRDGLAVNQIEGQSEHISRRRIRKLRGRQVLLDMVKKAEMERQREVQELLERRAVSHFPHRNRIQALLRGRFLRNDRPIDNNRSTSIAESELGLLRQKQTVSCLREGFSFRKDNLAYGQAASNISDTSSDSDIDVDRIEQTGATSSQVVASVHSEQSKPNNKTSERLGISCAHEEEETKNWESSSNISVERRDGTAQNGNTMPTEDTGNDLTQQSLQIEVTEHSNMQEQEPSEIHIEEFLLGDITGEESNLSNHNNRVGGNIIDNVDLVESVALEREQHEEIIIENEGSDWHQTNVEWRDSTQESVDDNQLSSTSNEWPQDILGNDGENSHLQEQVAASEVWQEDGSFQEAVEIWLGGPSDNGAAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQGHAHVEWELQETTPSSSSTEQDLEQQRRDQIVDTEDIVNSSLNLPLPPPPPPLPLWDRHSRHDNWSQNGINNQRRGTVHSFAGHSRFPLADDLDSISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGVHDHVSPDESKWECVRKGLCCICCEGNIDCLLYRCGHMCTCSKCANQLLDSRRKCPMCRAPVVEVIRAYSI* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0849 840 MobiDBLite consensus disorder prediction 69 130 - -
Mal4g0849 840 ProSiteProfiles Zinc finger RING-type profile. 789 828 IPR001841 -
Mal4g0849 840 MobiDBLite consensus disorder prediction 19 39 - -
Mal4g0849 840 Pfam Zinc finger, C3HC4 type (RING finger) 786 833 - -
Mal4g0849 840 CDD mRING-HC-C3HC5_NEU1 789 828 - -
Mal4g0849 840 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 768 839 IPR013083 -
Mal4g0849 840 Coils Coil 718 745 - -
Mal4g0849 840 PANTHER PROTEIN, PUTATIVE-RELATED 1 840 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 346 371 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 629 650 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 149 169 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 346 413 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 386 413 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 497 531 - -
Mal4g0849 840 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 840 - -
Mal4g0849 840 SUPERFAMILY RING/U-box 788 834 - -
Mal4g0849 840 MobiDBLite consensus disorder prediction 93 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0849 Mal-Chr4 10247404 10253836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0849 789 835 C3H Transcription Factor Family AT3G06140 40.426 8.75e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0849 - - vun:114184870 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0849 4 10247404 10253836 Mal7g1996 7 71838984 71845945 PCT