Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal4g0847 | ATGGAAAAGGATCTTAAGAAAGAGGCACAAAAGATGATCAGTTCCACCACTACTGATCAGAAAGATGATGCAGCAATGAATCCGGGAGGCACTGGTAGTGATTCTTCAACTACTCATCAAAAAGAAGTTAGTGGAGGTGATGATGTAGCAATGAATCCGGCAAGCGCAAAAATGGAGGAAGATCAACAGAAAGAAGGCGGCGATGATGCAGCATTGAGTGATTCTTCAACATTGCCATTGCCATTGGATTCTTCTATCAACATAACACCAAAGAAGAGAAAATTAGAATGGATTCTTGCTATTGATCCTTCTGAATCTGAAACTGAAACTTCTTCTTCCAAGAAAAGATGTGGAAGCCCTCCTCCTGCCATTGTGCATACAATTGATTTGAAAGCTGGCGAGGATGTGATGGATGCTATATTTGAACTATCTAAGGAATATGATCATCTTCGATTTGTTACCATAATTGCTGTGACCGGTTCTTTATCAGAAGTTGTCGTTCTTGATCCAAACGGTCCTCCTAACACGCTCAAGGGAGCATTTGAGATAAATTCTATATCTGTATCATGTCTAGCTGATGAAGATGGTCGTCATTGTCGCAAAAAGACAACATGCTCCGTTGTATTGATCGATGATAAGGGAAATACTATTGAAAGGGCCTCCGTGGGATGCCTCATAGCAGCCGGCCCTCTTGGAATTACTGCGGCCACTTTGGTGAAATCAGCTGGAGAATCTTCTGCTGATGCTCCTGCTCTAAAATGCGTGAAGGTTGAAAAGGTTATCGAAGAATTAAAATCTATTACAACAACTTCTCCGGATGCAGATGGAAACATAAATCTCACAGCAACTACTAGTGCAGGAAATGATCAGGACATAAAGTCTCCTTCTGAAGAGGACATTTGGAGTCCTATTCGCGATTAG | 921 | 0.4159 | MEKDLKKEAQKMISSTTTDQKDDAAMNPGGTGSDSSTTHQKEVSGGDDVAMNPASAKMEEDQQKEGGDDAALSDSSTLPLPLDSSINITPKKRKLEWILAIDPSESETETSSSKKRCGSPPPAIVHTIDLKAGEDVMDAIFELSKEYDHLRFVTIIAVTGSLSEVVVLDPNGPPNTLKGAFEINSISVSCLADEDGRHCRKKTTCSVVLIDDKGNTIERASVGCLIAAGPLGITAATLVKSAGESSADAPALKCVKVEKVIEELKSITTTSPDADGNINLTATTSAGNDQDIKSPSEEDIWSPIRD* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal4g0847 | 306 | MobiDBLite | consensus disorder prediction | 292 | 306 | - | - | |
| Mal4g0847 | 306 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 125 | 238 | IPR005175 | - | |
| Mal4g0847 | 306 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 125 | 234 | - | - | |
| Mal4g0847 | 306 | ProSiteProfiles | PPC domain profile profile. | 120 | 267 | IPR005175 | - | |
| Mal4g0847 | 306 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
| Mal4g0847 | 306 | Gene3D | - | 125 | 271 | - | - | |
| Mal4g0847 | 306 | MobiDBLite | consensus disorder prediction | 11 | 43 | - | - | |
| Mal4g0847 | 306 | MobiDBLite | consensus disorder prediction | 271 | 291 | - | - | |
| Mal4g0847 | 306 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 | 126 | 278 | - | - | |
| Mal4g0847 | 306 | MobiDBLite | consensus disorder prediction | 271 | 306 | - | - | |
| Mal4g0847 | 306 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 126 | 278 | IPR039605 | GO:0003680 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal4g0847 | Mal-Chr4 | 10180409 | 10181744 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal4g0847 | 79 | 239 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G62260 | 27.778 | 9.44e-10 | 57.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal4g0847 | - | - | mtr:MTR_1g052575 | 149.443 |