Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0836 ATGGAGTTTTGGGGTGCTGAGGTTAAGGTCGGAGAAACCATCAAGGTTGACCCATTTGAATTGGAGGCAATTGTTCATCTTTCTCAGGCTGCACTTGGTGAAGCGAAGAAAGACAAACCTAATGAGTCTGTCCTTGTTTACGTCAAAGTTGGTGAACAGAAGCTTGTTTTGGGAACCCTAAGCAGAGACAAAATTCCTCAGATATCTCTTGATATTGTTTTCAATAACGAATTTGAGCTTTCTCACAGTTCCAAAACTGCTAGCGAAGAAGAAGAATCTGATAGTGAAGATGAGGACATCCCATTGACTACCACATTGGGAAATGGCAAACCAGAACCAAACGCCGAGGATGTGAAGGTTTCTGAACCTAAAAAAGCTGATGCCAAGAATGCTGCACCTGCCAAGAAAGCTGCACCTGCAAAACAAGTGAAGGTTGTTGATCCTAAGGAGGACGAAGATGAAGATTCTGATGATGATGAGTCCGATGAGGAAAATGGGAGCTCTGATGATGAGATGGAGAATGCTGATAGTGAAGATGAAGATGATGAGAGTGATGAAGACGATGATGAAGAGACTCCTGTGAAGAAGGTGGACCAGGGGAAGAAGAGGCCCAATGAATCTGCTTCAAAAACTCCAGTTTCTACCAAGAAAGCAAAAAATGCCACTCCTGAAAAGACTGATGGTAAGAAAGCTGGACATACAGCAACTCCTCACCCTAAGAAAGGTGGAAAGACTCCTAACAGTGATGCCAAAACTCCCAAGTCTGGAGGACTCTCTTGCAATAGCTGCAGCAAGACATTCAACTCTGAAACTGGACTGCAACAACACAGCAAGGCCAAGCATGCTGCTAAGTAA 855 0.4398 MEFWGAEVKVGETIKVDPFELEAIVHLSQAALGEAKKDKPNESVLVYVKVGEQKLVLGTLSRDKIPQISLDIVFNNEFELSHSSKTASEEEESDSEDEDIPLTTTLGNGKPEPNAEDVKVSEPKKADAKNAAPAKKAAPAKQVKVVDPKEDEDEDSDDDESDEENGSSDDEMENADSEDEDDESDEDDDEETPVKKVDQGKKRPNESASKTPVSTKKAKNATPEKTDGKKAGHTATPHPKKGGKTPNSDAKTPKSGGLSCNSCSKTFNSETGLQQHSKAKHAAK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0836 284 Pfam Nucleoplasmin-like domain 3 84 IPR041232 -
Mal4g0836 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 258 284 IPR013087 -
Mal4g0836 284 MobiDBLite consensus disorder prediction 220 234 - -
Mal4g0836 284 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 280 - -
Mal4g0836 284 MobiDBLite consensus disorder prediction 150 192 - -
Mal4g0836 284 Gene3D Nucleoplasmin core domain 1 91 - -
Mal4g0836 284 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 280 - -
Mal4g0836 284 ProSitePatterns Zinc finger C2H2 type domain signature. 260 281 IPR013087 -
Mal4g0836 284 MobiDBLite consensus disorder prediction 248 276 - -
Mal4g0836 284 MobiDBLite consensus disorder prediction 115 131 - -
Mal4g0836 284 MobiDBLite consensus disorder prediction 81 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0836 Mal-Chr4 10066465 10070202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0836 1 283 C2H2 Transcription Factor Family AT5G03740 38.095 6.22e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g0836 NPL 1.3e-11 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0836 - - gmx:100792094 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0836 4 10066465 10070202 Mal4g0836 4 10066465 10070202 ECH