Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0822 ATGAACTTGGAGAATGAATCTACATCCAATTGCCAACATTCTCCATCAAATCCAAACTCACACAAGAAGAAAACAGGAAGAAAGAAATTCAAGGAGACAAGGCACCCAATATATAGAGGAGTTCGTCAAAGAAATAATGGCAACAAATGGGTGTGTGAAATTTGTGAACCAAACAAGAAGAAATCAAGAATATGGCTTGGAACTTACCCTACACCAGAAATGGCAGCTATAGCACATGATGTAGCTGTTCTAGCACTTCATGGGACTTCAGCAATGTTCAATTTCCCTCATTCAGTTTCTCTTCTTCCGGTTTCGAAATCAACTTCAGCTGAAGATATAAGAGAAGCTGCATCAAAAGCTGTAAAGGCTTTTTCAAACACTACTCCTTCTTGTGTTAACAACTTGAGAGTTGAGACTAAGTCTTGTTTGATGGAATGTAAGAGTCAAGAAACGGTTTTTGAAGGTGATAATATTGAGATTATGAATAATAATGATGAGTCTAAAACAATGTTTTTTGATGAGGAGGTTTTGTTTAATATGCCAGTTTTTTTGGATAGCATGGCAGAGGGCTTGATCATTACTCCACCCTCCATGAAGAGTGCATTGGATTGGGATGATGTTGATTGTGAAATGGATTTAACACTATGGACAGAATAA 657 0.3714 MNLENESTSNCQHSPSNPNSHKKKTGRKKFKETRHPIYRGVRQRNNGNKWVCEICEPNKKKSRIWLGTYPTPEMAAIAHDVAVLALHGTSAMFNFPHSVSLLPVSKSTSAEDIREAASKAVKAFSNTTPSCVNNLRVETKSCLMECKSQETVFEGDNIEIMNNNDESKTMFFDEEVLFNMPVFLDSMAEGLIITPPSMKSALDWDDVDCEMDLTLWTE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0822 218 CDD AP2 36 98 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 MobiDBLite consensus disorder prediction 1 19 - -
Mal4g0822 218 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 5 217 - -
Mal4g0822 218 Pfam AP2 domain 36 88 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 217 IPR045277 GO:0003700
Mal4g0822 218 SUPERFAMILY DNA-binding domain 37 98 IPR016177 GO:0003677
Mal4g0822 218 Gene3D AP2/ERF domain 37 98 IPR036955 GO:0003700|GO:0006355
Mal4g0822 218 ProSiteProfiles AP2/ERF domain profile. 37 96 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 MobiDBLite consensus disorder prediction 20 34 - -
Mal4g0822 218 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 SMART rav1_2 37 102 IPR001471 GO:0003700|GO:0006355
Mal4g0822 218 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0822 Mal-Chr4 9825063 9825719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0822 22 217 AP2-EREBP Transcription Factor Family AT5G51990 47.449 7.39e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g0822 AP2 7.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0822 - - gmx:100803317 259.61