Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0815 ATGGATTCGAATCAAGGACATCTAGTTAAACTGGAATTATTTTTACCATTTCATTCAAGTAATCTTGGTAGTGAAATGAAGATTATCGCTGCTTACTTGTTGGCCGTTTTGGGAGGCAACCAATCCCCTTCTGCTACTGATCTTAAACAAATTCTCGGATCAGTTGGAGTTGAGGCTGAGGATGACAACATTGAGTTGCTCCTAAGTGAAGTCAAGGGCAAAGATTTCGCAGAGCTAATTGCTAGTGGAAGAGAAAAGTTGGCTTCAGTTCCATCTGGTGGTGGTGCTGTTGCTGTTTCTGCTGCAACTGGAGGAGGTGCTGCAGCTGCCGCACCTGCTGCCGAAGCTAAGGAGGAGAAGAAGGTGGAAGAGAAGGAAGAATCTGATGATGATATGGGATTCAGCTTATTTGATTAA 417 0.4388 MDSNQGHLVKLELFLPFHSSNLGSEMKIIAAYLLAVLGGNQSPSATDLKQILGSVGVEAEDDNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVSAATGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0815 138 Pfam 60s Acidic ribosomal protein 42 137 - -
Mal4g0815 138 CDD Ribosomal_P2 26 138 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mal4g0815 138 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 16 138 - -
Mal4g0815 138 MobiDBLite consensus disorder prediction 114 128 - -
Mal4g0815 138 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 16 138 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mal4g0815 138 MobiDBLite consensus disorder prediction 108 138 - -
Mal4g0815 138 Hamap 50S ribosomal protein L12 [rpl12]. 27 138 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mal4g0815 138 Gene3D - 25 84 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0815 Mal-Chr4 9705101 9706783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0815 26 95 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 75.714 7.99e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0815 K02943 - aof:109825870 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0815 4 9705101 9706783 Mal4g0815 4 9705101 9706783 ECH