Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0803 ATGGGTTTGAGGGATCAATGCAATGTAGAAGACAAGAATCTCTACCTTCAAACCCCAACTTTCATTGAATGGCTCAAACCATCTAATTCCTCACTCTCCTCATCTCCTTCATCATCTTTAACTCATCAACACAAACTATCCCAAGAAACTTTTCAGTTTTTACCCATCTCTAATGGAAATAACCCCTTTGAGGACAACCATGGGATGCAAAAGGAAGATTTTGAAGTAAAAGAAGAGAAGGTGGAACATGTGACTGTGGCTTTGCACATTGGATTGCCTAACATAGGAGGTGAATCTAATGAACATGATGAGAAGAATAAGGTTTTTGATTGTGTTAAGGAAGAAGAATTGAAGAAAAACGTGCATGGTTTTTGTTTTAAGGAGGAGAGAAGGTTTTGGATACCAACTCCTGCTCAAATTCTTGTTGGACCTATGCAGTTTGCTTGCTCCATATGTAGTAAGACCTTCAATAGATACAACAATATGCAGATGCATATGTGGGGACATGGATCTGAATTCAGGAAAGGACCAGACTCACTTAAAGGAACACAACCAGCAGCAATGCTAAGGCTGCCATGTTATTGTTGTGCTCATGGTTGCAAGAACAACATCAATCATCCAAGAGCAAAACCATTGAAGGATTTCAGAACTCTCCAAACTCATTACAAAAGAAAGCATGGAACAAAACCATTTATTTGCAGAAAATGTTCTAAAGCATTTGCTGTTAAAGGTGATTGGAGAACTCATGAGAAAAACTGTGGAAAGTTTTGGTATTGCACTTGTGGTTCAGATTTTAAACACAAAAGATCTCTTAAAGATCATGTTAGATCCTTCGGAAAAGGTCATTCCCCACATCCTTCTCTTGAAGGCTTTGAAGATGAGAAAGAATGCAGCAATACCGGGTCCGATGATGATGAAATTGCTCATGCATGA 933 0.3869 MGLRDQCNVEDKNLYLQTPTFIEWLKPSNSSLSSSPSSSLTHQHKLSQETFQFLPISNGNNPFEDNHGMQKEDFEVKEEKVEHVTVALHIGLPNIGGESNEHDEKNKVFDCVKEEELKKNVHGFCFKEERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFICRKCSKAFAVKGDWRTHEKNCGKFWYCTCGSDFKHKRSLKDHVRSFGKGHSPHPSLEGFEDEKECSNTGSDDDEIAHA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0803 310 ProSitePatterns Zinc finger C2H2 type domain signature. 149 169 IPR013087 -
Mal4g0803 310 SUPERFAMILY beta-beta-alpha zinc fingers 217 251 IPR036236 -
Mal4g0803 310 PANTHER ZINC FINGER PROTEIN WIP2 42 306 IPR043584 GO:0003700|GO:0010468
Mal4g0803 310 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 1 41 - -
Mal4g0803 310 SMART c2h2final6 231 251 IPR013087 -
Mal4g0803 310 SMART c2h2final6 147 169 IPR013087 -
Mal4g0803 310 SMART c2h2final6 194 226 IPR013087 -
Mal4g0803 310 SUPERFAMILY beta-beta-alpha zinc fingers 138 170 IPR036236 -
Mal4g0803 310 MobiDBLite consensus disorder prediction 275 310 - -
Mal4g0803 310 Pfam C2H2-type zinc finger 147 166 - -
Mal4g0803 310 Gene3D Classic Zinc Finger 208 286 - -
Mal4g0803 310 Gene3D Classic Zinc Finger 146 169 - -
Mal4g0803 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 147 174 IPR013087 -
Mal4g0803 310 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 42 306 - -
Mal4g0803 310 PANTHER ZINC FINGER PROTEIN WIP2 1 41 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0803 Mal-Chr4 9386632 9389659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0803 8 300 C2H2 Transcription Factor Family AT1G08290 57.738 1.32e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g0803 zf-C2H2_6 0.00014 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0803 - - gmx:100819306 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0803 4 9386632 9389659 Mal4g0803 4 9386632 9389659 ECH