Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0795 ATGGCTAGCCAAAGAATAGGAGAAGTTGATTTTTCTGAGTCAGGACATGCAACTTATGGAATTCATCATAGGATTAACAATCCTTCATCAAGTTTAATGAATGAAGAATCTAGTTTTGATTTTGGGGAGCTAGAAGAAGCAATTGTTCTGCAAGGAGTTAATAGTAGAAATGATGAAACAAAAGCATCTTTTTTCACAGCCAGACCTGCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAACCTCAACAGGAGGTAACAAATCAGGAGGGGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAGCAAGAATCACCCTTAAGTAAAAAAGCATCTTCTTTTTCATCAGATCATAATAATAATAATTTTGATCAGCAGAATCTACAGCTACAACAACAGAAAATGATGTTACCAAATGATGCTGCTATAAGAACAGCTTCTTCATCACAGAATCAAATATCAGCAGCCAAAGAAAAGTTGCAGAAAAAAGGAGCTGGTTCCACATCAGATAAGCCACTTGATGCAAAGACATTGAGACGTTTAGCACAAAACAGGGAGGCTGCAAGAAAAAGTCGTCTAAGGAAAAAGGCTTATGTGCAGCAACTTGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAGTGGTGGTGTTGGAGGCAATATAAGCTCTGGAGGTGCAATGTTTGACATGGAATATGCAAGATGGGTAGAAGATGACAACCGTTTATTAACAGAGCTAAGAAATGGATTGCAAGCAGCATTAACAGATAATGAAATGAGAGTAATGGTGGATGGATATTTGTGTCATTATGATCAAATATTTAGACTCAAAGGTGTAACTGCAAAAACAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCTTCTGAAATTATCATGATGTTGATCCAACAATTGGAGCCACTAGCTGAACAGCAAATAATGGGAATGTATGGACTGAGACATTCTTCACAGCAAGCAGAGGAAGCTCTCTCTCAAGGACTTGACCAGTTGCAACAGTCTCTTGTTGACACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCCATAGGCAAGCTTGCCAATCTTGAAGGATTTCTTCGCCAGGCTGATAACTTGAGGCAACAAACTCTTCACCAACTATGTCGATTACTCACACTTCGTCAAGCGGCACGCTCTTTTCTTGTTATTGGAGAATATTATGGACGACTTCGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGACCATGATAAGTGATGATAACTCGTGCCAAACAACCACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCTCAAATTTCTGA 1467 0.4001 MASQRIGEVDFSESGHATYGIHHRINNPSSSLMNEESSFDFGELEEAIVLQGVNSRNDETKASFFTARPAATLEMFPSWPMRFHQTSTGGNKSGGESSDSALSSKNENPFEQESPLSKKASSFSSDHNNNNFDQQNLQLQQQKMMLPNDAAIRTASSSQNQISAAKEKLQKKGAGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMFMDWSGGVGGNISSGGAMFDMEYARWVEDDNRLLTELRNGLQAALTDNEMRVMVDGYLCHYDQIFRLKGVTAKTDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAIGKLANLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRETMISDDNSCQTTTDMQMVQPSQNHFSNF* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0795 488 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Mal4g0795 488 MobiDBLite consensus disorder prediction 78 132 - -
Mal4g0795 488 MobiDBLite consensus disorder prediction 81 132 - -
Mal4g0795 488 ProSiteProfiles DOG1 domain profile. 249 457 IPR025422 GO:0006351|GO:0043565
Mal4g0795 488 Pfam Seed dormancy control 267 340 IPR025422 GO:0006351|GO:0043565
Mal4g0795 488 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Mal4g0795 488 Gene3D - 184 233 - -
Mal4g0795 488 MobiDBLite consensus disorder prediction 155 186 - -
Mal4g0795 488 SUPERFAMILY Leucine zipper domain 185 227 IPR046347 GO:0003700|GO:0006355
Mal4g0795 488 SMART brlzneu 181 258 IPR004827 GO:0003700|GO:0006355
Mal4g0795 488 Pfam bZIP transcription factor 184 226 IPR004827 GO:0003700|GO:0006355
Mal4g0795 488 PANTHER TRANSCRIPTION FACTOR TGA9 61 467 - -
Mal4g0795 488 CDD bZIP_HBP1b-like 185 235 - -
Mal4g0795 488 PANTHER TRANSCRIPTION FACTOR TGA9 61 467 - -
Mal4g0795 488 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0795 Mal-Chr4 9285806 9292553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0795 134 488 bZIP Transcription Factor Family AT1G08320 66.761 2.82e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal4g0795 DOG1 1.3e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0795 4 9285806 9292553 Mal4g0795 4 9285806 9292553 ECH