Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0793 ATGTATCACCATCATCACCAAGGAAAAAATATTCACTCTTCTTCAAGAATGTCAATACCATCTGAGAGGCACATGTTCCTTCAAACAGGAAATGGTTCTAGTGATTCAGGACTTGTGCTCTCAACTGATGCAAAGCCTAGATTAAAATGGACACCTGATCTTCATGCAAGGTTTATAGAAGCAGTGAATCAGTTAGGTGGAGCAGATAAGGCTACTCCGAAAACAGTAATGAAACTCATGGGGATTCCAGGACTTACCTTATATCATTTAAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAACCTGCATGGACAAAGCAGCAGTAATGTGACACACAAAATAAACACACATGCAGCTTCAGTAAGTGATGAGAGACTTTCTGAAAACAATGGAACTCACATCAATAAACTAACTCTTGGACCACAGACACAAAATAATAACAAAGATTTACACATAAGCGAGGCACTTCAAATGCAGATTGAAGTTCAGAGAAGACTCAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTAGGATAGAGGCTCAAGGAAAATACCTTCAATCAGTGCTTGAAAAAGCTCAAGAAACACTTGGTAAACAGAATTTAGGAATAGTAGGACTTGAAGCAGCTAAAGTTCAACTATCAGAGCTTGTGTCAAAAGTATCCTCACAGTGTTTGAATTCAACATTTTCAGAGATGAAAGAGTTACAAGGATTTTGTCCTCAACCAAATGACGGCTCGATGGACAGTAGTTGCTTAACATCGTGCGACCGATCACAAAAGGAACAAGAGATCATTCAAAATGGAGGGTTTGGATTAAGACACTTCAACAACAATAACCATGTGTTTATGGAAAGAAAAGACCAACAACCAACAGAACTAGCAGGTTCTGTTCAAAACCTTAGAAACAATGAAGTACTAAAATGGTGTGTTGATGAAGTGAAAAAGAACAGTAATTTTCTGACACCATTAGGAAATAATAATGAATTAGAAAGAAATCATGGAAATTTGTCTATGAACATTGGAGTTGAAAGTCACTTAGATATTGGTGAGTTTCAACACAAGAACACTGCAAGAACAGAAACAATGAAATCAATGGATGAAAATAATAAGATGCAACAACCTTCTAATTACTTTTCAGCTTCAAGATTGGATCTAAACGCTCGTGGAGATAATCATGAAGGCGGTACAAGTTGTAAACAACTTGATTTGAATAGGTTCAGTTGGAACTAA 1239 0.3697 MYHHHHQGKNIHSSSRMSIPSERHMFLQTGNGSSDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSSSNVTHKINTHAASVSDERLSENNGTHINKLTLGPQTQNNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGKQNLGIVGLEAAKVQLSELVSKVSSQCLNSTFSEMKELQGFCPQPNDGSMDSSCLTSCDRSQKEQEIIQNGGFGLRHFNNNNHVFMERKDQQPTELAGSVQNLRNNEVLKWCVDEVKKNSNFLTPLGNNNELERNHGNLSMNIGVESHLDIGEFQHKNTARTETMKSMDENNKMQQPSNYFSASRLDLNARGDNHEGGTSCKQLDLNRFSWN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0793 412 Pfam MYB-CC type transfactor, LHEQLE motif 152 198 IPR025756 -
Mal4g0793 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Mal4g0793 412 Coils Coil 154 174 - -
Mal4g0793 412 Gene3D - 44 102 - -
Mal4g0793 412 PANTHER MYB-RELATED PROTEIN 2 4 412 - -
Mal4g0793 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 412 IPR044848 GO:0003700
Mal4g0793 412 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Mal4g0793 412 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Mal4g0793 412 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0793 Mal-Chr4 9274788 9276763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0793 77 412 G2-like Transcription Factor Family AT3G04030 47.727 6.61e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal4g0793 Myb_DNA-binding 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0793 - - gmx:100810396 550.051