Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0734 ATGTTAGATCTTAATCTGAATGACGATTACGAAGACTCGATCATGCTGGTGGAAAAACTTCCAGAAGCTTCATCAGGAACTTCGAATTCATCTATAGTGAATGCAGAGGCTTCAAGTAACATCACCGGTGATGAAGACTCGTGTTCAACACGCGCCGGTGGTGTTTTCACTTTCAAATTCGGTATCCTGAAGGTGGAAGGAGGTAACGACGACGTTGTTGTTCCGACGAAGGAGTTTTTTCCGGTGAGTGCCGGGACATCGGCGATGATGATTCCGGCGAGGAAGAGCACGATGGATCTAACAATGGATCGTCGTGTTGGAGGTGAAAATGGAGTTGTTGAAGTTCAGCAAAAGCCTCAGGTGAAGAAGAGTAGGAGAGGACCAAGGTCGAGAAGCTCTCAATACAGAGGAGTCACGTTCTATCGGAGAACTGGAAGATGGGAATCGCATATCTGGGATTGTGGGAAGCAAGTTTATTTGGGTGGATTTGACACGGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATAAAGTTCAGGGGACTTGATGCTGACATTAATTTCAATCTGGTTGAGTATGAGGAAGACATGAATCAGATGAAGAATCTTTCAAAGGAGGAATTTGTGCACATACTACGTCGCCACAGTAATGGTTTCTCAAGGGGGAGTTCAAAATACAGAGGAGTAACACTTCACAAATGTGGTCGTTGGGAGGCTAGAATGGGACAACTCCTTGGCAAAAAGGCTTATGACAAAGCAGCTCTAAAATGCAATGGAAGAGAGGCTGTGACCAACTTTGAGCCAAGTACATATGAAAATAAGATGAAACCAGAAGCTATTAATGAAGGTGCCAGTCACAATCTTGACCTTAATTTGGGCATGGCGACTCCAGGACATGAACCCAAAGAAAACAGAGGGTATCTACAATTTCAGACCGTTCCTTCTTACAACCTGCATCCTGAAAGGAATTTAAAGATGGAGACTAATGCTAATTCAGTTATTGGTGACCCATCTTTGAAAAAGCTGGTTGTAACTGAACAGCGTCCTTCCATGTGGAATGCCACGTTTTCAAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATTGGCATTGATCCTTCAAAAGGACTCCCCAACTGGGCGTGGCAAGGGCATAGTCAGGGCACTGCTTCCCCAGTACCACAATTCTCTACTGCAGCATCATCAGGATTCTCCATTTCAGCTACCTTTCCACCAAATGCAATATATCAAACACAACCCATGAACTCAATTCCACAGACACTCTGTTTCACTCCATCCATCACACCTGGTAGCAATGCATCTCAATACTATTACCAGGTTAAGTCCTCGCAGGCACCACCATAG 1368 0.4488 MLDLNLNDDYEDSIMLVEKLPEASSGTSNSSIVNAEASSNITGDEDSCSTRAGGVFTFKFGILKVEGGNDDVVVPTKEFFPVSAGTSAMMIPARKSTMDLTMDRRVGGENGVVEVQQKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVEYEEDMNQMKNLSKEEFVHILRRHSNGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKAYDKAALKCNGREAVTNFEPSTYENKMKPEAINEGASHNLDLNLGMATPGHEPKENRGYLQFQTVPSYNLHPERNLKMETNANSVIGDPSLKKLVVTEQRPSMWNATFSSFFPNEERAERIGIDPSKGLPNWAWQGHSQGTASPVPQFSTAASSGFSISATFPPNAIYQTQPMNSIPQTLCFTPSITPGSNASQYYYQVKSSQAPP* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0734 455 Gene3D AP2/ERF domain 225 269 IPR036955 GO:0003700|GO:0006355
Mal4g0734 455 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
Mal4g0734 455 ProSiteProfiles AP2/ERF domain profile. 134 190 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 424 - -
Mal4g0734 455 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 SUPERFAMILY DNA-binding domain 133 190 IPR016177 GO:0003677
Mal4g0734 455 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 424 - -
Mal4g0734 455 CDD AP2 225 270 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 SMART rav1_2 226 274 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 SMART rav1_2 134 196 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 CDD AP2 134 189 IPR001471 GO:0003700|GO:0006355
Mal4g0734 455 SUPERFAMILY DNA-binding domain 225 269 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0734 Mal-Chr4 8200641 8204433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0734 1 455 AP2-EREBP Transcription Factor Family AT5G60120 45.582 8.09e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g0734 AP2 2.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0734 K09284 - gmx:100777102 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0734 4 8200641 8204433 Mal7g2170 7 77480454 77483997 PCT