Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0714 ATGGATGATTTGATTTCAAGTTGTAAGGAAAAATTGCAATATTTTCGTGTAAAAGATCTCAAAGATGTGCTTACTGAGGTAGGAATTTCGAAGCAGGGAAAGAAGCAGGATCTTATCGATAGGATATTATCTATTATCTCAGAGGAACAAGTTGCCAAAATACGGGCGAAGAAGAATGCTGTTGAAAAAGAACAAGTGGTAAAATTAGTGGAGGACACATATAGAAAACTGCAGGTATCTGGAGCCACTGATCTAGCGTCAAAGGGGCAAGGTGCTTCAGACAGCAGTAATGTGAAAACTAAGGGTGAAGTTGATGATTCCTTTCAATCAGATAAAAAGGTTCGATGTATCTGTGGAAGTTCATTGGAAACAGATCTAACGATCAAGTGTGAAGATACAAAATGCCCTGTGTATCAACATCTCAACTGCGTTATTATTCCGGATACACCCACTGAAGGACTCCCGCCAATCCCAGATACATTTTATTGTGAAATATGTCGTCTCAGTCGTGCAGACCCGTTTGCGGTTTCAATGGCACACCCTTTACTTCCGGTGAAGTTGGCTACAACCCATATTCCAACTGATGGAGCCAACCCCGTGCAGAGTGCTGAGAAAACATTTCAACTTACAAGAGCAACCAAGGAAATAGTATTAAAATCGGAATTTGATATTCAGGCTTGGTGCATGCTTCTGAACGACAAAGTTCCATTCAGGATGCAATGGCCACAATATGCAGACCTAGTGGTAAATGGTTATTCTGTTCGTGCAATTAATAGACCCGGTTCGCAATTGCTTGGGGCTAATGGTCGTGATGATGGCCCAATTATCACACCATATATAAAAGAAGGAGTTAACAAGATTTGTTTGACGGGGTGCGACACTCGCATTTTCTGTTTAGGGGTCCGCATTGTTAGAAGACGCAGCGTGCAACAGATCTTGAACACGATTCCAAAGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCACGTGTCTGTTTTCGTGCTGGGGGTGGAAGTTCAGCTGATGAGGCTGGTAGTGACAGTGATCTGGAAGTAGTTTCAGATACTTTTAGCATCAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGATCAAGAAAGTGGCAATGCCCCATATGTCTCAAAAACTATGCTCTGGAGAATATCATTATTGATCCTTATTTCAATCGCATCACTTCTATGATGAAAAACTGTGGGGAGGAGTTTACAGAGGTGGAGGTGAAACCTAATGGTTATTGGCGTGTCAAGGCTAAGAATGAAAGTGAATGCCGCGAGTTGGGGAATCTTGCTAAATGGCACTGTCCTGACGGATCCCTCCCTGTTTCTACTAGTGGAGAAGACAAGAGAGTGGAAACTTTGAATGTCAAACAGGAAGGTGTTTCAGACAGTCCTACAGGCTTAAGACTTGGCATTAGGAAAAACTGTAACGGAGTTTGGGAAGTCAGCAAACCCATGGACACAAACACCTCTTCTGATAAATTGAATGTGGATTTAGGAAATCATGAAGTTGTGGTTATTCAAATGAGCAGCAGTGGCTCTGGAAGTAGATTGGATGGTGATGATCCAAGCGTAAATCAAAGTGGTGGTGGGCATACAACTTATTCTCCAACTAATGGGATTGAGACGGATTCTATGTGTCACGCTAATGTTGATCCAACTTATGGATATACTGTTCCTAACCCTTCTGCTCCGATGGCTAATGCAGAAATTATTGTTCTTAGTGATTCTGAAGATGATGATATATTAGTATCTCCTACAGTTGGTTGCGGAAATAATCAAACTGGTGATGCAGTTGATGCTTACTCAGTGCCTCCACCTGGAATTATGGATCCATATGCAGGAGATCACAGTATTGGTGGAAATCCATGCTTGGGAGTATTTGATAATCCCAGTGAAGGCCTTTTTGGGATTCCCTCCGTCTGGCCATTGCATTCTGGAACTCAGGCAAGCTCGGGATTCCAACTATTCAGTTCTGATGTGGATGTGTCTGATGCATTGGTCCATGGTGATATTAATTGCTCCTCATCACTGAATAGTTATACATTGGCTCCTGACACTGCTCTGGGATCTAGTACTCTAATACCAAATTCATCCACTGATCGGTCTAACACTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGGTGGACAGGATCCCTCGCTTCAGATTTTTCTCCCTACAAGACCAGCAGAATCATCTGTGCAGCATGAATTAAGAAATCATGCAGATGTGTCGAATGGTGTCTGCACAGAGGATTGGATCTCTCTTAGGCTTGGGGGTGGGGCTGGTGGCAGTAATGGTGACGCTTCCACATCAAATGGTTTGAATTCCAGACCACAAATTACATCCAGAGAAGATGCCACAGATTCTTTAACAGATTCTTTAAATGAGACTGGTTTATTACTTTCTGAGACTGCTTCCTTGCTGGCAAGTATGAATGATGCCGGATCTGACAAAGCAAGTAGGAAAAGATCAGATGGGCCTTTCTCATTTCCCCGCCAAAAACGTTCAGTAAGGCCCCGCTTGAATCTTTCTATTGGTTCAGATTCAGATTAG 2664 0.4253 MDDLISSCKEKLQYFRVKDLKDVLTEVGISKQGKKQDLIDRILSIISEEQVAKIRAKKNAVEKEQVVKLVEDTYRKLQVSGATDLASKGQGASDSSNVKTKGEVDDSFQSDKKVRCICGSSLETDLTIKCEDTKCPVYQHLNCVIIPDTPTEGLPPIPDTFYCEICRLSRADPFAVSMAHPLLPVKLATTHIPTDGANPVQSAEKTFQLTRATKEIVLKSEFDIQAWCMLLNDKVPFRMQWPQYADLVVNGYSVRAINRPGSQLLGANGRDDGPIITPYIKEGVNKICLTGCDTRIFCLGVRIVRRRSVQQILNTIPKESDGERFEDALARVCFRAGGGSSADEAGSDSDLEVVSDTFSINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMKNCGEEFTEVEVKPNGYWRVKAKNESECRELGNLAKWHCPDGSLPVSTSGEDKRVETLNVKQEGVSDSPTGLRLGIRKNCNGVWEVSKPMDTNTSSDKLNVDLGNHEVVVIQMSSSGSGSRLDGDDPSVNQSGGGHTTYSPTNGIETDSMCHANVDPTYGYTVPNPSAPMANAEIIVLSDSEDDDILVSPTVGCGNNQTGDAVDAYSVPPPGIMDPYAGDHSIGGNPCLGVFDNPSEGLFGIPSVWPLHSGTQASSGFQLFSSDVDVSDALVHGDINCSSSLNSYTLAPDTALGSSTLIPNSSTDRSNTDLNGGLVDNPLAFGGQDPSLQIFLPTRPAESSVQHELRNHADVSNGVCTEDWISLRLGGGAGGSNGDASTSNGLNSRPQITSREDATDSLTDSLNETGLLLSETASLLASMNDAGSDKASRKRSDGPFSFPRQKRSVRPRLNLSIGSDSD* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0714 887 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Mal4g0714 887 MobiDBLite consensus disorder prediction 543 577 - -
Mal4g0714 887 CDD SP-RING_Siz_plant 361 409 - -
Mal4g0714 887 Gene3D SAP domain 2 65 IPR036361 -
Mal4g0714 887 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 10 812 - -
Mal4g0714 887 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Mal4g0714 887 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 10 812 - -
Mal4g0714 887 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Mal4g0714 887 MobiDBLite consensus disorder prediction 848 887 - -
Mal4g0714 887 SMART sap_9 12 46 IPR003034 -
Mal4g0714 887 MobiDBLite consensus disorder prediction 801 828 - -
Mal4g0714 887 MobiDBLite consensus disorder prediction 799 828 - -
Mal4g0714 887 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 336 448 IPR013083 -
Mal4g0714 887 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Mal4g0714 887 MobiDBLite consensus disorder prediction 543 578 - -
Mal4g0714 887 ProSiteProfiles SAP motif profile. 12 46 IPR003034 -
Mal4g0714 887 Pfam SAP domain 14 43 IPR003034 -
Mal4g0714 887 SUPERFAMILY FYVE/PHD zinc finger 108 170 IPR011011 -
Mal4g0714 887 SMART PHD_3 115 167 IPR001965 -
Mal4g0714 887 SUPERFAMILY SAP domain 4 65 IPR036361 -
Mal4g0714 887 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0714 Mal-Chr4 7831365 7840444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0714 - K22403 gmx:100811996 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0714 4 7831365 7840444 Mal7g2132 7 76321102 76332010 PCT