Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0713 ATGGAAATTGATCTGAATGATTCCATTTCTGAGTTTGAGAAGAACAAGAAGAATGTGTGTTGCAATGATGAATGTGAGAAAAATGTATGTTGTGTTTGCACTTTATCTTCTTCTTCTTCACCAACATGTTCATCTTCTAGTTCCACTTCAGCTCTTGTTTCTTCTTCTTATCTTGAGCTATGGCATGCCTGTGCTGGCCCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTGGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCTCTCTTTTCTTCATTGGAGATACCAACTTTTGATCTTCAGCCACAGATTTTTTGTAGGGTTGTCAATGTTCAATTACTTGCCAATAAGGAGAATGATGAGGTTTATACACAGGTTACTTTGCTTCCACAGGAAGAGTTAGTAGGGATGTGTTTGGATGGCAAAGAGGCTGAAGTGTTGGAAGCAGATGAAGAGGGAAATGGAAGAACAATAACATCTACAAAGTTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGTACTCATGGAGGGTTTTCGGTTCCTCGTAGAGCTTCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCGTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTAGAGTGGAAATTTCACCATATTTACCGAGGTCAGCCAAGGAGGCATCTTCTCACTACTGGCTGGAGTATTTTTGTTAACCAAAAGAATCTTGTTTCTGGGGACGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGACTTAAGATTGGGAATTAGAAGAGCTGCTCGACCGAGAAACGGTCTTCCTGAATCAACTGTTGGTAACCAGAGTTGTTCTCCTAGTTTCCTTTCTTCTGTGGCTAATGCTATCTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCCAATTTCGTCGTGCCTTACCAAAAGTATGTTAAAAGCATGAGTAGTCCAGTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGAAAGAAGGTGTAGTAGTGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCTAAATCAAAATGGAGATGCTTGATGTGA 1149 0.4047 MEIDLNDSISEFEKNKKNVCCNDECEKNVCCVCTLSSSSSPTCSSSSSTSALVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTFDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQEELVGMCLDGKEAEVLEADEEGNGRTITSTKLASHMFCKTLTASDTSTHGGFSVPRRASEDCFPPLDYKQQRPSQELVAKDLHGVEWKFHHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGDLRLGIRRAARPRNGLPESTVGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHANFVVPYQKYVKSMSSPVTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLM* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0713 382 Pfam Auxin response factor 299 381 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g0713 382 PANTHER AUXIN RESPONSE FACTOR 37 382 - -
Mal4g0713 382 SUPERFAMILY DNA-binding pseudobarrel domain 167 285 IPR015300 -
Mal4g0713 382 CDD B3_DNA 171 273 IPR003340 GO:0003677
Mal4g0713 382 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 382 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g0713 382 Pfam B3 DNA binding domain 173 274 IPR003340 GO:0003677
Mal4g0713 382 SMART B3_2 173 275 IPR003340 GO:0003677
Mal4g0713 382 Gene3D - 170 275 IPR015300 -
Mal4g0713 382 ProSiteProfiles B3 DNA-binding domain profile. 173 275 IPR003340 GO:0003677
Mal4g0713 382 Gene3D - 337 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0713 Mal-Chr4 7825595 7829780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0713 53 382 B3 DNA Binding Superfamily AT5G60450 76.061 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g0713 B3 1.1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0713 - - gmx:100812909 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0713 4 7825595 7829780 Mal7g2128 7 76294312 76299014 PCT