Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0709 ATGGAGGGACAACAAAAAGGATCGAAATCCGATTACACTTTTCCGCCCGGTTTTAGATTCCACCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAATCGCGTCCACTTCCAGCGTCGATTATAGCTGAAATTGATCTCTATAAGTATAATCCATGGGAGTTACCTAAGAAGTCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTATCCGAATGGATTAAGGCCGAACAGAACAGCGGCTTCTGGATACTGGAAGGCAACTGGAACTGATAAGCCAATAATCTCTTCTTGTGGATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGTGTTAAATCAGATTGGATCATGAATGAATATAGGTTGGTTGACACAACCACAAAATCATTCAAGCTTAAAGGTTCCATGAGGTTGGATGATTGGGTATTATGCCGGGTTCGAAATAAAGGCTACTCATTGAAGAATTTATCTGAAAATCAAGAGAATCCTAGTGAACCAAACATACCACTAAACCTACAGAGAGGTGAAGAACAACACCAAACAAACACGAACTTTCGAGCTGACATGATAACAGATTATCAATACAAAGACTATCAGATTATAGCCTCTATTCTTGTTGGTGGAGTTATACATCCAACTGAGAACATTTCAAGTATGAGCTTTAATGGAAGCAAATGCAACAATCTAACTTCAGTTTATGAAGAAGGTTTCAATAAAGTGAGTTCTCAAACTACAATAATCCCTTCTTTGGAATGTTACTTCAATCCACTAAAAGGAAAATCTAATGAGGATGATGATGATCAGTTTGAAAATCTCATTTCTTTTAACAAGTTCAACAATGAGAACATAATAAGCAAATCTCCTAGCATCGATTTTCAAAAGCTAAACGAATTTACTTTTACATAA 963 0.3676 MEGQQKGSKSDYTFPPGFRFHPSDEELIVHYLQNKIKSRPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRTAASGYWKATGTDKPIISSCGSKHIGVKKALVFYSGRPPKGVKSDWIMNEYRLVDTTTKSFKLKGSMRLDDWVLCRVRNKGYSLKNLSENQENPSEPNIPLNLQRGEEQHQTNTNFRADMITDYQYKDYQIIASILVGGVIHPTENISSMSFNGSKCNNLTSVYEEGFNKVSSQTTIIPSLECYFNPLKGKSNEDDDDQFENLISFNKFNNENIISKSPSIDFQKLNEFTFT* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0709 320 PANTHER NAC TRANSCRIPTION FACTOR 56 10 304 - -
Mal4g0709 320 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 304 - -
Mal4g0709 320 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Mal4g0709 320 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Mal4g0709 320 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Mal4g0709 320 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0709 Mal-Chr4 7790792 7792216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0709 10 179 NAC Transcription Factor Family AT1G69490 66.471 6.41e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g0709 NAM 1.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0709 - - ccaj:109819036 474.937