Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0697 ATGAATTCTAACCAAAAATATCATCATGATGAACTTTCTTCTTGCCAAAGAACAGTTTCTCTTCCAGTTCACAAGGAAAATCTTTTGATGGAAATACCATACAAAACAAGAGAAGAATCTTCTTGTTCATCATCTTCAAATGATTTTGTTGGAATAAAGATGCCATTAACACCAAGTCCACCTTCAACACACAAGAGGGTTAATTTTCTTGTGACATCACGTTCTGTTGATGCACCAATTGATAATAATAGTAGTAACAATCTTGGAATTTCAACAACAAGAGCAAAATCATCAAATAGAAGTATTTTGCCAAAATTGAATTTCAGGTATAATAGGACATCATCATCAGATATCGAAAAGGCGATGATTGCAGCGCCGGAAAGTTCTTTTGTAGGGCCTCATGAGAAGTCTTCAATCTCAGGATCAGTGTCTTTGAGTAAGATATTTAATCCTAAGATTAATAGGACTTCATCATTACCTGTTGAAGAAATTGGACGTGTTAACACAGAATTTGCTTTTGGTGGATGTCTTGGTGCTTCTCCATATAGAAGCCAGGGGACAATAGCTCGATCTCGTTCAGAGCCTGTAGATAGCCAAGAAAAAATTACAAGGAAAATGGATAAGTTTTTCCGCGTTATTCCTTCCACCCCAGGTGTAAAGGAAGTGAAGGAATGGCTAAAATCGTCGACAGCAAAGGAAAATGAAAATGACGGTGATGACGGTGAAGATATAGCCGAAGAGGAAGCTGTGTGTAGAATTTGTCTGATTGAGCTATGTGAAGGAGGTGAGACATTGAAGATGGAATGCTGTTGCAAAGGTGAACTTGCCTTGGCTCACCAAGAATGTGCAATTAAGTGGTTTAGTATCAGAGGTAACAAGACATGTGATGTGTGCAAGGAGGAAGTTCAGAACCTCCCTGTCACTCTCTTACGGATCCAAAGTGTTCAAACTCAGAATACCGGAACAAGGTCTCAGCAGGAAGATGACTTCAGGGTTTGGCAGGAGTTGCCTGTGCTTGTCATTGTCAGCATGCTTGCTTATTTCTGTTTCCTTGAGCAGCTTTTGGTTAAAAAAATGGGAACCAGAGCGATTTTCATTTCTCTTCCATTTTCCTGTGTACTTGGTCTAGTCTCCGCCATGACATCGACAACCATGGTGAGGAGCAGGTTCATCTGGCTTTATGCATCTGCTCAATTTCTTTTGGTGGTTCTCTTCGCGCATATATTTTACCCCTTGGTTGGTAAGCAAGCAGTTTTGGCAATCCTTCTCGCATCATTTGCTGGGTTTGGTGTAATGATGAGCGGAAGTTCAGTTATTGCGGAGTTACTCAAATGGAGAAGAAGATGGCAAGCTTACTCAGAGCAGCAGCGTCGTGACTCTCAAGTGATGACACAAGAAGAACTATATCCTCAAGGTGTAATTACCCCACAATCAAGTCTTCCCAACCATAACCAAACCACAGTGCAACTGCAAAATCAACCGAATTCAAGTTCATAG 1497 0.4061 MNSNQKYHHDELSSCQRTVSLPVHKENLLMEIPYKTREESSCSSSSNDFVGIKMPLTPSPPSTHKRVNFLVTSRSVDAPIDNNSSNNLGISTTRAKSSNRSILPKLNFRYNRTSSSDIEKAMIAAPESSFVGPHEKSSISGSVSLSKIFNPKINRTSSLPVEEIGRVNTEFAFGGCLGASPYRSQGTIARSRSEPVDSQEKITRKMDKFFRVIPSTPGVKEVKEWLKSSTAKENENDGDDGEDIAEEEAVCRICLIELCEGGETLKMECCCKGELALAHQECAIKWFSIRGNKTCDVCKEEVQNLPVTLLRIQSVQTQNTGTRSQQEDDFRVWQELPVLVIVSMLAYFCFLEQLLVKKMGTRAIFISLPFSCVLGLVSAMTSTTMVRSRFIWLYASAQFLLVVLFAHIFYPLVGKQAVLAILLASFAGFGVMMSGSSVIAELLKWRRRWQAYSEQQRRDSQVMTQEELYPQGVITPQSSLPNHNQTTVQLQNQPNSSS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0697 498 Pfam RING-variant domain 251 298 IPR011016 GO:0008270
Mal4g0697 498 ProSiteProfiles Zinc finger RING-CH-type profile. 243 305 IPR011016 GO:0008270
Mal4g0697 498 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 468 - -
Mal4g0697 498 SMART ringv_2 250 299 IPR011016 GO:0008270
Mal4g0697 498 PANTHER OS02G0165000 PROTEIN 20 468 - -
Mal4g0697 498 SUPERFAMILY RING/U-box 247 302 - -
Mal4g0697 498 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 306 IPR013083 -
Mal4g0697 498 CDD RING_CH-C4HC3_MARCH 251 299 - -
Mal4g0697 498 MobiDBLite consensus disorder prediction 477 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0697 Mal-Chr4 7622195 7625916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0697 239 305 C3H Transcription Factor Family AT2G37950 41.176 2.55e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0697 - - cam:101488558 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0697 4 7622195 7625916 Mal7g2104 7 75228154 75236112 PCT