Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0677 ATGAAGGAAGCTGAGAAAAGCTTAGATCCACAGCTATGGCACGCATGTGCAGGAGGAATGGTTCAAATGCCATCAGTGAACACAAAAGTGTTCTACTTTCCACAAGGGCATGCAGAACATGCACAATCCAACGTTGATTTTGGAGATTCTTTCAGAATTCCACCACTCATCCTCTGTAGAGTGGCTTCTGTGAAATTCTTAGCTGACCCTGAAACAGATGAAGTCTTTTCAAAGATAACTTTGATTCCCTTAAGAAATTCAGAGCTTGAAAATGATGATTCTGATGGTAATGGTTCGGAGAATTCAGAAAAGCCCGCTTCTTTTGCAAAGACTTTGACACAATCTGATGCAAACAATGGTGGAGGTTTTTCTGTTCCTAGATACTGTGCTGAGACCATTTTTCCACGGCTTGATTACTCGGCCGAGCCACCGGTTCAGACGGTGATTGCGAAGGATGTTCACGGCGAGGTTTGGAAGTTTAGACATATCTATAGAGGAACACCAAGGAGGCACTTGTTAACAACTGGTTGGAGTAGTTTTGTGAATCAGAAAAAACTTGTTGCAGGTGATTCTATAGTATTTTTGAGAGGTGAAAATGGAGAACTTTTTGTTGGGATTCGTCGTGCGAAGAGAGGAATTGTCAATGGATTGGAAACACCTTCTGGATGGAGTTCTGGTAATGGAAGTTCTGGTCTTGGTGTTGGACCTTATGGTGGTGCTTTTTCTGTTTTTTTGAGAGAGGAGAATAAGTTGGGGGGTGTTGGTGGTAATTTGGGGGGTGGAAGAGTAAAAGTGAGTGGTGAATCTGTGAAAGAAGCTATGAGACTTGCAGCTAGTAATCAAACATTCGAGGTTGTTTATTATCCAAGAGCAAGTACTCCTGAGTTTTGTGTCAAGACTTCAGCTGTAAAAGCTGCTATGAGAATTCAATGGTGTTCTGGAATGAGGTTTAAGATGCCATTTGAAACCGAGGATTCTTCAAGGATTAGTTGGTTCATGGGGACTATTTCTTCTGTTCAGGTTGTTGATCCTATTCGTTGGCCTAATTCCCCTTGGAGACTTCTTCAGGTAACTTGGGATGAACCGGATTTGCTACACAATGTGAAGCGAGTAAGTCCATGGTTGGTCGAATTAGTAGCAAACATGTCAGTGATTCATCTAGCACCCTTCTCACCACCAAGGAAGAAACTCCGTTTTCCACAACATCCGGATTTCCCTCTCGATGTTGTTCAGTTTCCAATACCAACATTTTCAGGCAACCCTTTTAACCCTTTGGGTTGTCTATCTTCTTCCGATCATTATAACGCTCCTGCCGCAGGCATTCAGGGAGCCAGGCATGCTCAAATTGGAATATCTTTATCGGATCTTCACCTTAACAACAACAAATTTCAGTTAGGTGTGTTTCCAAATAATCCTGAGAAGATTTCTAATGTTAGCAACAAAACAACCAACCATGATAATAAGAGCAAAGAAAGCTTATCATGTTTGTTGACTATAGGAAATTCTCACAAGAGAAGTTTGGAGATTAAATCTGATAATAATGTTAAGAGACACCAATTTTTGCTTTTTGGTCAACCAATTCTCACTGAACAACAAATCTCTAGAAAACCTTCTAGTGATGATGTGTTGTTGTCCAAGAATAAGGACAAAGAGAAGTGGTTTTTCAGTGATACTACTCAATCTTCACTTTCTGAACAATTTTCACCAGCAAAATCTTCTACTACTAGTGCTAGTGCTGACTTTTGTTGGCAACTTGGATTAGACACTGGTCATTGCAAGGTTTTCTTGGAGTCAGAGGATGTTGGAAGAACATTAGACTTGTCATGTGTTGGTTCTTATGAAGAACTATATAGAAAACTTGCTAAGATGTTTGGAATAGAAAGATCTGAAATGTTGAATCATGTACTCTATCGCGACGCAACAGGTGCTGTTAAGCAAACTGGTGAAGAACCCTTCAGTGATTTCATGAAGACAGCAAAAAGATTGACAATTCATATGGATTCAGCTAGTAAAGATACTAGAAGGGTGTGTATCACAGGAACTAGGAATGCTGAACGTGGATTAGATGCATCAAATAAGACAGGACCTATGAGCATCTTTGTTTAA 2106 0.4031 MKEAEKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVDFGDSFRIPPLILCRVASVKFLADPETDEVFSKITLIPLRNSELENDDSDGNGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRGENGELFVGIRRAKRGIVNGLETPSGWSSGNGSSGLGVGPYGGAFSVFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCVKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVANMSVIHLAPFSPPRKKLRFPQHPDFPLDVVQFPIPTFSGNPFNPLGCLSSSDHYNAPAAGIQGARHAQIGISLSDLHLNNNKFQLGVFPNNPEKISNVSNKTTNHDNKSKESLSCLLTIGNSHKRSLEIKSDNNVKRHQFLLFGQPILTEQQISRKPSSDDVLLSKNKDKEKWFFSDTTQSSLSEQFSPAKSSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSYEELYRKLAKMFGIERSEMLNHVLYRDATGAVKQTGEEPFSDFMKTAKRLTIHMDSASKDTRRVCITGTRNAERGLDASNKTGPMSIFV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0677 701 PANTHER AUXIN RESPONSE FACTOR 2 676 - -
Mal4g0677 701 CDD B3_DNA 107 208 IPR003340 GO:0003677
Mal4g0677 701 Gene3D - 588 673 - -
Mal4g0677 701 ProSiteProfiles PB1 domain profile. 589 669 IPR000270 GO:0005515
Mal4g0677 701 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 676 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g0677 701 SUPERFAMILY DNA-binding pseudobarrel domain 102 210 IPR015300 -
Mal4g0677 701 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g0677 701 Gene3D - 311 385 - -
Mal4g0677 701 SMART B3_2 108 210 IPR003340 GO:0003677
Mal4g0677 701 Gene3D - 106 210 IPR015300 -
Mal4g0677 701 ProSiteProfiles B3 DNA-binding domain profile. 108 210 IPR003340 GO:0003677
Mal4g0677 701 Pfam B3 DNA binding domain 108 209 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0677 Mal-Chr4 7322680 7325740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0677 3 675 B3 DNA Binding Superfamily AT2G28350 58.228 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g0677 B3 1.3e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0677 - - mtr:MTR_2g094570 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0677 4 7322680 7325740 Mal7g2085 7 74666843 74670270 PCT