LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal4g0661	ATGTTACGGCGTGAAGAGGATCCATTAAAGTGGGATGAAGCGGCAGAGGCGTTGAAAGGGAGCCATTTTGAGGAAGTGAAGAGGATGGTGGAAGATTATAGGAAGGATGTTGTGAGGGTGGGAGGGGAGACATTGAGGGTGGGGGAAGTGGTTGCGGTCGCGGAGAGGATGGCGGTTGTGGAGCTGAATGAGGGGGCAAGGGTTAGAGTGAAGGAGAGTAGTGAGTGGGTGATGGAGAGTGTTCATGAAGGTACTGATTGTTATGGTGTCACTACTGGCTTTGGTTCAACCTCCCATAGAAGAACTAATCAAGGTCATGCCCTTCAAACTGAGCTCATTAGGTTTTTAAATGCTGGAATTTTTGGAAATGGAACAGAACAGTGCCATACATTGCCACGAAATGCAACAAGAGCTGCAATGCTAGTAAGAATCAACACACTTCTTCAAGGTTACTCAGGAATCAGATATGAAATACTAGAAGCCATTACAAAACTTCTCAACCACAACATTACACCATGTTTACCTTTGCGCGGATCAATTTCCGCCTCAGGTGACTTAATTCCATTTTCTTACATAGCTGCACTTCTAACAGGTAGACCTAATTCTAAAGCTATTAATGGATCCAATGGTGAAACCCTAAATGCTGCAGAAGCTTTTAATTTAGCTGATATAGGTGAAGCATTCTTCAATTTGCAACCTAAAGAAGGTCTTGCACTTGTTAATGGAACTGGTGTTGGTGCTGGTTTAGCTTCTATAGTTCTATTTGATGCTAATATCTTAACTGTTTTATCTGAAATTATGTCGGCGATATTCGCTGAAGTTATGCAAGGGAAACCAGAGTTTACAGATCATTTGACACATAAACTGAAGCATCATCCAGGTCAAATTGAAGCTGCAGCATTGATGGAACATATTTTGCATAAAAGTGCTTGTGTTCATGCCGCAACGAAATCGCATGAGATAGATTATTATAGAAAGCCTAAACAAGATAGATATGCACTTAGGACTTCACCACAATGGTTAGGTCCACAAATTGAAGTTATTAGGTATTCAACAAAATCAATTGAGAGAGAGATTAATTCTGTGAATGATAATCCTTTGATTGATGTGAAAAGGAACAAAGCTTTGCATGGTGGAAACTTTCAAGGTACACCAATTGGTGTTTCTATGGACAATACAAGATTAGCTTTGGCTGCAATTGGAAAATTAATTTTCGCTCAAATGTCCGAGTTGGTTAATGATTTTTACAACAATGGTTTGCCCTCAAATCTCTCTGGTGGTAAATGTTTAAGTTTGGATTATGGACTTAAAGGCGGCGAGATAGCAATGGCTGCATATTGTTCTGAGCTTCAGTTTTTAGCTAATCCTGTTACTAATCATGTTCAAAGTGCTGAACAGCATAATCAAGATGTTAATTCACTTGGATTAATATCAGCTAGGAAAACAGCAGAAGCTGTTGAGATATTAAAGCTTATGTGTTCAACTTACTTGATTGCTTTATGTCAAGCAATAGATTTGAGGTATTTGGAGGAGAATCTAAAAATCACAGTTAAGAAAACAGTGAGTCAAGTGGCTAGAAAAATATTAAATGTAGGAGTTAATGGTGAGATTCATCATTATATGTCTTGTGAGAAAGATTTGCTTAAAATGGTTGATTGTGAATATGTTTTTACATATATTGATGACCCTTGTAATGACACACATCCACTCATGCAAAAAATGAGGCAAGTGCTTGTGGAACATGCATTGAGGAGTAGTAATAGTAATGGTTTGAAAAGTATAAATGCTTCTATGTTCCTCAAGATAGGTGCATTTGAGGAGGAACTAAAAAGGGTCTTGCCAAAAGATGTTGAATCTACAAGAAGTGCTTTTGAAAAAGGAATTTTAGCAAGTCCTAACAAAATCAAGGAATGCAGGTCTTATCCATTGTATAAGTTTGTTAGAGAGGAATTGGGGACTGAATTTTTAACAGGTGAGAAAATTAAATCACCAGGAGAAGATTTTGATAAAGTTTTTAATGCAATTACTCTTGGAAAGATAATTGATCCAATGTTTGAATGCCTTAAGGATTGGGATGGTACTCCCCTTCCTGTAGAATTTCAATAG	2106	0.3794	MLRREEDPLKWDEAAEALKGSHFEEVKRMVEDYRKDVVRVGGETLRVGEVVAVAERMAVVELNEGARVRVKESSEWVMESVHEGTDCYGVTTGFGSTSHRRTNQGHALQTELIRFLNAGIFGNGTEQCHTLPRNATRAAMLVRINTLLQGYSGIRYEILEAITKLLNHNITPCLPLRGSISASGDLIPFSYIAALLTGRPNSKAINGSNGETLNAAEAFNLADIGEAFFNLQPKEGLALVNGTGVGAGLASIVLFDANILTVLSEIMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAALMEHILHKSACVHAATKSHEIDYYRKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVKRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLIFAQMSELVNDFYNNGLPSNLSGGKCLSLDYGLKGGEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMCSTYLIALCQAIDLRYLEENLKITVKKTVSQVARKILNVGVNGEIHHYMSCEKDLLKMVDCEYVFTYIDDPCNDTHPLMQKMRQVLVEHALRSSNSNGLKSINASMFLKIGAFEEELKRVLPKDVESTRSAFEKGILASPNKIKECRSYPLYKFVREELGTEFLTGEKIKSPGEDFDKVFNAITLGKIIDPMFECLKDWDGTPLPVEFQ*	702

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal4g0661	701	Gene3D	-	2	243	IPR024083	-
	Mal4g0661	701	Gene3D	-	510	633	IPR023144	-
	Mal4g0661	701	TIGRFAM	phe_am_lyase: phenylalanine ammonia-lyase	7	689	IPR005922	GO:0005737\|GO:0006559\|GO:0016841
	Mal4g0661	701	CDD	PAL-HAL	43	507	IPR001106	-
	Mal4g0661	701	Gene3D	Fumarase/aspartase (Central domain)	245	693	-	-
	Mal4g0661	701	PANTHER	HISTIDINE AMMONIA-LYASE	6	698	IPR001106	-
	Mal4g0661	701	Pfam	Aromatic amino acid lyase	45	511	IPR001106	-
	Mal4g0661	701	PANTHER	AMMONIA-LYASE, PUTATIVE-RELATED	6	698	-	-
	Mal4g0661	701	SUPERFAMILY	L-aspartase-like	6	698	IPR008948	GO:0003824

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal4g0661	Mal-Chr4	6971866	6974679	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal4g0661	1	698	Monolignol Biosynthesis Gene Families	AT2G37040	72.286	0.0	1060

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal4g0661	K10775		-	vvi:100241575	1065.83

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