Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0657 ATGCATAATCTTGTTCAAGTAAGAAACATTAGAAATGCCAATATGCTAGATGAACCTCCTGTTGTTTATTCATCAACAGAAATGCTCAACTTTCCAAACTACACATTGGAGTATCATGAACTACTAGGTGCAGCAGAACCAAGTAGGTTAATGATGCAACATTATCATCAGCAAAAACAACAGTACTACTCTGAACTGAGTGATTTTGGAAATTGGAGAAACTGTGTTCCTGCTTCACAATCACATCAACTCACTGATCAATATTGGTTATTAAACAATGCAACCAATTCTCTTTCTTATGTATATGGTGCTGAAAAGAAATTAGGTAGTAATTTGATGCATCAGAATCAGAATAATAATTCTTCTTTGCAGGATGTTGTCAAGTCAGAGTCAGAAATAGCATCACTTATGCATCATAATGGTCAAGGAGTTTGTGTAGGAAATGCTTTTGAACCAAAACCACAAAGCTTATCATTATCACTTTCATCTAATCATATTACACAAAACAAGTCTTATTTTGAAGAGGGGACTTCTTCAACAGATGAATTTCAAACTATGAAGCATATGAAACCTTCCATTGTTCCTAGAGATTGTGGAAAATCATTGCAAGACTTGCTGGTTGGAACAATTCCTAATTCAAAGAGTCTTACAAGTACTAGTTATGGAAATCTTGGTCCACTTGGCCCTTTTACTGGTTATGCTACTATTCTTAAGAGTTCAAGATTCTTGAAGATTGCACAAAATTTGTTAGATGGGTTTTGCTATCCAAAATTTGTGACAACATGTGATGTTTCAGAAACTGAGGTTGTTTCTAAAGGGAGTAATTATTCATGTGCTTCATCATCTATGTTCCATAGTGCTGATTGGGGGAACAGAAGTAGTAATTATCAGCAGAATAAAGCAAACCTTATGTTCATGCAAGAAGAGGTTAACAAGCGATACAAGCAGTACCATCAACAAATGCAAATGGTTTTTTCATCCTTTGAATCAGTAGCAGGTCTTAATTCAGCTACTCCTTACATTAACTTGGCTTTGAAGTCGGTATCAAAACACTTCAAGTGCCTAAACAATGAGATTTCAAATCAGCTCAAACTTACAAGTGAAGTCCTGCGAAATGATTCGTCGATACCAATCACAACCAATAGTACTAATGATGTGGCAAGCCTAAGATGCATGGATCAAAGCCTACAAAAGAATAAACTTGAAATGGTTCCATCAGGTTTTCATGATCCACAACAGCAGCATGTTTGGAGACCTCAGAGAGGCTTTCCCGAACGTGCGGTGGCGATTCTTAGAGCTTGGTTGTTTGAACATTTTCTTCATCCTTACCCTACGGACACTGATAAACATGTGTTGGCTACTCAGACAGGTCTTTCGCGAAACCAGGTATCAAATTGGTTTATTAATGCTCGAGTTCGTGTGTGGAAGCCTATGGTTGAAGAAGTACACATGTTAGACAAAAAAACAACAGGTGCTAGTGAGAATTCCAGTCCAAATGAGAGAACTTCTGGCACTGAAGTGGGTTCGTGCAGCCAGCCTAGAATGGATAAGGCATTCAATCAGTTTGTTATGCATTCAATACCTGAAAATCAAATTCAGGGTATGGAATATGATTCATCTATAGATACAAATGCTGAAGAAAGTGAGTTCAATGAAGCAGAACAATGGAGTAGAGTGAAGAGGTCTAAATTGGAATGTGGAATGAGTTCAAGAATGGATGGAACATTGATGGATTTTTTGCCATATAGACATAGTGGAAATGATGTTGTGAGATCACTTGGATTGGATCTGTTTCATTGA 1800 0.3717 MHNLVQVRNIRNANMLDEPPVVYSSTEMLNFPNYTLEYHELLGAAEPSRLMMQHYHQQKQQYYSELSDFGNWRNCVPASQSHQLTDQYWLLNNATNSLSYVYGAEKKLGSNLMHQNQNNNSSLQDVVKSESEIASLMHHNGQGVCVGNAFEPKPQSLSLSLSSNHITQNKSYFEEGTSSTDEFQTMKHMKPSIVPRDCGKSLQDLLVGTIPNSKSLTSTSYGNLGPLGPFTGYATILKSSRFLKIAQNLLDGFCYPKFVTTCDVSETEVVSKGSNYSCASSSMFHSADWGNRSSNYQQNKANLMFMQEEVNKRYKQYHQQMQMVFSSFESVAGLNSATPYINLALKSVSKHFKCLNNEISNQLKLTSEVLRNDSSIPITTNSTNDVASLRCMDQSLQKNKLEMVPSGFHDPQQQHVWRPQRGFPERAVAILRAWLFEHFLHPYPTDTDKHVLATQTGLSRNQVSNWFINARVRVWKPMVEEVHMLDKKTTGASENSSPNERTSGTEVGSCSQPRMDKAFNQFVMHSIPENQIQGMEYDSSIDTNAEESEFNEAEQWSRVKRSKLECGMSSRMDGTLMDFLPYRHSGNDVVRSLGLDLFH* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0657 599 Gene3D - 420 482 - -
Mal4g0657 599 CDD homeodomain 417 478 IPR001356 GO:0003677
Mal4g0657 599 Pfam Homeobox KN domain 434 473 IPR008422 GO:0003677|GO:0006355
Mal4g0657 599 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 595 - -
Mal4g0657 599 SUPERFAMILY Homeodomain-like 418 482 IPR009057 -
Mal4g0657 599 MobiDBLite consensus disorder prediction 489 511 - -
Mal4g0657 599 SMART HOX_1 417 481 IPR001356 GO:0003677
Mal4g0657 599 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 7 595 - -
Mal4g0657 599 SMART prehox3 231 361 IPR006563 -
Mal4g0657 599 MobiDBLite consensus disorder prediction 486 511 - -
Mal4g0657 599 Pfam Associated with HOX 236 360 IPR006563 -
Mal4g0657 599 ProSiteProfiles 'Homeobox' domain profile. 414 477 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0657 Mal-Chr4 6933087 6935993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0657 204 505 Homeobox Transcription Factor Family AT5G02030 48.254 1.05e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal4g0657 POX 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0657 - - mtr:MTR_2g095050 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0657 4 6933087 6935993 Mal7g2064 7 74069272 74077699 PCT