Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0652 ATGGCAGAGGAAAGGGTTGGATACAATTTTGATGTTTCTAGAGTCCCTTCAACAGGATATCCTTCCATGTCAGATTGTTTCAAGTTTGATGTCACTGCTATCCTTCGCGATTACTCCTCAAGTCATCATAGGCTGACGGTGTCATCCTTGTTCACAACTTCGATACTTATAAATTGCAATAGTTTCTTCAATCACAACGAAAATTTTCTATGGTTAAACTTACAGCGATTTTCCTCTCCGTATTTCAATTCTGAAAACCTTGCCCTAATGACACTTAGTCTTATATCTAAGGTCAAACAGTTGTTCGGCTTCTCTGATTCTTTTGAACTAGGGGAACCATTTACTAGCTTTCCAATGGAAGAGATCCCTTTGGTGTTACGTATTATAGTGGACGTGCATCGAACTGAAGAAAGAGTGACTCAACAAGAGAGGATGATGATGGAGCGTGCATCCGTGGAAGAGTCCATGCAATTTGCAAAAACAATTCCTGCATCCAATGAAGCCGTTTTGTCCCTTAGAGCTTTCTCACTTCCTCGCAATTGCACCATATGTATGGAGAGATTTCATGATGATATAAAAGAAGAAGGCGATGATAGTGACGACGTGAAGGTGTCAACAATGCCATGCGGTCATATATTTCACTATAATTGTATTGTCAAGTGGTTGCAAAAGGGCCATGTATGTCCCTTGTGTCGATATGCTATGCCCATCTAA 714 0.4048 MAEERVGYNFDVSRVPSTGYPSMSDCFKFDVTAILRDYSSSHHRLTVSSLFTTSILINCNSFFNHNENFLWLNLQRFSSPYFNSENLALMTLSLISKVKQLFGFSDSFELGEPFTSFPMEEIPLVLRIIVDVHRTEERVTQQERMMMERASVEESMQFAKTIPASNEAVLSLRAFSLPRNCTICMERFHDDIKEEGDDSDDVKVSTMPCGHIFHYNCIVKWLQKGHVCPLCRYAMPI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0652 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 236 IPR013083 -
Mal4g0652 237 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 112 236 - -
Mal4g0652 237 SMART ring_2 181 231 IPR001841 -
Mal4g0652 237 ProSiteProfiles Zinc finger RING-type profile. 181 232 IPR001841 -
Mal4g0652 237 PANTHER F6A14.12 PROTEIN-RELATED 112 236 - -
Mal4g0652 237 SUPERFAMILY RING/U-box 180 235 - -
Mal4g0652 237 Pfam RING-H2 zinc finger domain 180 232 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0652 Mal-Chr4 6854545 6855258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0652 149 236 C3H Transcription Factor Family AT1G18760 37.234 4.63e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0652 - - gmx:102665086 135.191