Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0635 ATGGTTTCTGAAGCCAGCAAGAAAAAAGCTGCTCAGAAGAAGGCTGCCGCCGCCGCTAAGAGAGGTGGCAAGGTAGCTGCCGCCGCTGCTTCGACGAAAACGGCGTTGGTGAAAGCGGTGGATAGTGTTGCTAACGGAATTGGGGATATTCAGATATCTGATCGGACATGCACCGGTGTTCTTTGCTCTCATCCTCTTTCTAGGGATATTAGGATAGAATCTCTATCAGTTACTTTCCATGGACATGATCTTATAGTTGATTCTGAATTGGAGCTAAACTATGGAAGACGTTATGGTTTGCTTGGATTAAACGGTTGTGGAAAATCTACCCTGCTTACGGCAATCGGTTGCCGTGAGCTTCCTATTCCAGACCACATGGATATTTATCACCTTAGCCGGGAAATTGAAGCCTCGGACATGTCTGCATTGGAGGCTGTCATTAGCTGTGACGAGGAACGGTTGAGGTTGGAGAAAGAAGCTGAAATTCTGGGAGCACAAGATGATGGCGGTGGGGAAGCCCTTGAACGAGTTTATGAACGATTGGAAGCTATGGATGCATCAACCGCAGAGAAGCGTGCTGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGGAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGATGGAGAATGAGGATTGCTTTAGCACGAGCCTTATTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTAGATTTGGAAGCATGTGTGTGGTTGGAGGAGAATTTGAAGAAGTTTGACCGTATTCTGGTTGTGATTTCACACTCCCAAGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAAAGCTGAAGCTCTATACTGGCAATTATGATCAATATGTTCAGACACGTGCTGAACTGGAAGAGAACCAGATGAAGCAGTACAAGTGGGAGCAGGAGCAGATTGCCTCAATGAAGGAATACATTGCACGATTCGGCCATGGATCAGCAAAGCTAGCTCGCCAAGCTCAGAGTAAAGAGAAGACTCTTGCAAAAATGGAGCGCGGTGGACTTACAGCGAAGGTGGTAAGAGATAAAATTTTAGTTTTCCGCTTTGTTGATGTAGGAAAACTTCCCCCACCTGTGCTCCAGTTTGTGGAGGTGACATTTGGTTACACTCCTGATAATCTCATCTACAAGAATATCGACTTTGGGGTCGATTTAGACTCTCGGATTGCTTTGGTTGGACCCAATGGAGCTGGGAAGAGCACATTCCTGAAGCTTATGACAGGTGATTTGGTTCCCTTAGATGGCATGGTTCGTCGCCATAATCACCTTCGCATTGCACAATTTCACCAGCATTTGACTGAAAAGCTTGACTTGGAACTGTCTGCTCTCCAATTTATGATTAAAGAATACCCTGGAAATGAGGAAGAGAGGATGAGAGCAGCTATTGGGAAGTTCGGATTGTCAGGCAAAGCGCAGGTAATGCCTATGAGAAATTTATCCGATGGACAGAGGAGTCGCGTGATTTTTGCATGGTTAGCATATAGACAGCCTCACTTGCTACTATTAGATGAGCCAACTAATCATTTGGATATCGAGACAATCGACTCGTTAGCCGAGGCATTGAATGAATGGGATGGTGGCCTGGTGCTTGTCAGTCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCTGATCAAACAGTGACCAGATGGGAAGGTGACATTATGGATTTCAAGCAGCACCTAAAGGAAAAGGCAGGTTTATCTGACTGA 1791 0.4511 MVSEASKKKAAQKKAAAAAKRGGKVAAAAASTKTALVKAVDSVANGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSALEAVISCDEERLRLEKEAEILGAQDDGGGEALERVYERLEAMDASTAEKRAAEILFGLGFNKEMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTAKVVRDKILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTFLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLELSALQFMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKQHLKEKAGLSD* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0635 596 Pfam ABC transporter 88 242 IPR003439 GO:0005524
Mal4g0635 596 SMART AAA_5 94 296 IPR003593 -
Mal4g0635 596 SMART AAA_5 406 573 IPR003593 -
Mal4g0635 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 314 IPR027417 -
Mal4g0635 596 Gene3D - 363 594 IPR027417 -
Mal4g0635 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 575 IPR027417 -
Mal4g0635 596 CDD ABCF_EF-3 381 573 - -
Mal4g0635 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 310 IPR003439 GO:0005524
Mal4g0635 596 PANTHER - 1 596 - -
Mal4g0635 596 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 596 - -
Mal4g0635 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 596 IPR003439 GO:0005524
Mal4g0635 596 Pfam ABC transporter 397 528 IPR003439 GO:0005524
Mal4g0635 596 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524
Mal4g0635 596 CDD ABCF_EF-3 70 287 - -
Mal4g0635 596 Pfam ABC transporter 281 353 IPR032781 -
Mal4g0635 596 Coils Coil 288 308 - -
Mal4g0635 596 Gene3D - 70 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0635 Mal-Chr4 6589721 6593353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0635 381 574 Calmodulin-binding Proteins AT2G36910 26.316 1.50e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0635 4 6589721 6593353 Mal4g0635 4 6589721 6593353 ECH
Mal4g0635 4 6589721 6593353 Mal7g2042 7 73204720 73208206 PCT