Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0629 ATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAGAAAGGACCATGGTCACCAGAAGAAGATTCAAAGCTTAAAGAGTATATAGAAAAACATGGAACTGGTGGAAATTGGATTTCTCTTCCTCAAAAAGCTGGTCTAAGGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATTTAAGGCCAAACATTAAGCATGGAGAATTTTCAGATGAAGAAGACAGAATCATTTGCACTCTTTATGCTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAATTACCTGGAAGAACTGATAATGATATCAAAAACTATTGGAACACAAAACTAAAGAAGAAACTCATGAATTTGCTTCCTCAATCTCATAACACTTATCTAACCTCTTCTCCATTTCCTTCTCAATGCAACTCATATAATAATTATTACAATCAAACACAACCAAACACATCATCTTTCACTACATCTCTTGAACCAATTTCTCTTCCTTCATCAAGTAGCTCAATCTCTTACCCTTTTTACCATAACCAAGAGTCCTTACTCAATGGTACTTCCATGCAATATCAACACCCTATGATGAAAGAAAGTGTTGTCATGTTTGGAAGTGAGGGAAGTTGTTGCAGTTCATCTGATGGGAAACAAGAAGAAATAATGGGATTTCAGAATTTCATGCAAATCAATAAGTTCAATCTTAGTCATGGAAGTGATGTTGTTGATGTTAACCAATGGGAAAGAGAAAAGGTGAATTTTTGCTTTAGTCAAAATCAAAAGCAAATTATTACTACTACACCATTGGATTATGATCTTGAGTATATTAAGCAATTAATTAGTAGTAGTAATAATGGGTACTTGAACATTGATGAAAACAAGACTGAGGAGAAGAGTATGTACTATTACTGA 906 0.3444 MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKHGTGGNWISLPQKAGLRRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMNLLPQSHNTYLTSSPFPSQCNSYNNYYNQTQPNTSSFTTSLEPISLPSSSSSISYPFYHNQESLLNGTSMQYQHPMMKESVVMFGSEGSCCSSSDGKQEEIMGFQNFMQINKFNLSHGSDVVDVNQWEREKVNFCFSQNQKQIITTTPLDYDLEYIKQLISSSNNGYLNIDENKTEEKSMYYY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0629 301 Gene3D - 69 132 - -
Mal4g0629 301 Gene3D - 7 68 - -
Mal4g0629 301 CDD SANT 16 62 IPR001005 -
Mal4g0629 301 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal4g0629 301 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mal4g0629 301 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mal4g0629 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mal4g0629 301 PANTHER OS09G0431300 PROTEIN 1 283 - -
Mal4g0629 301 SMART sant 13 64 IPR001005 -
Mal4g0629 301 SMART sant 67 115 IPR001005 -
Mal4g0629 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal4g0629 301 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mal4g0629 301 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mal4g0629 301 PANTHER TRANSCRIPTION FACTOR RAX3 1 283 - -
Mal4g0629 301 CDD SANT 70 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0629 Mal-Chr4 6506465 6507865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0629 1 119 MYB Transcription Factor Family AT5G65790 88.235 5.29e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g0629 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0629 K09422 - gmx:100796382 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0629 4 6506465 6507865 Mal4g0629 4 6506465 6507865 ECH
Mal4g0629 4 6506465 6507865 Mal7g2035 7 73044314 73046032 PCT