Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0617 ATGAGTTGTTTTCGCTTCAAAAGCAAATCACGTGAAAAGATCGAAATCAACAACAATTCTAGCCGTAGAGAGAAGCACAGTAATATCACTTCAGCTGATAAGGTCAAAGTTGATTTGAATTTGAATTTGAGTGTGATGAAAGATAAAAATGAAGATGATTCTAAACATGATCAACTTTCCTTGGACGTGAAGAATTTGAATTTAAAAGACGGCGTTACAACGGATGGTAAAGTTGCAAAGACATTTACTTTTGATGAACTTAAAGCTGCAACAGAAAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACCTTGAGAAAGTTAATCAGGTTGTTGCAATTAAGCAACTTGACCCTAATGGGCTTCAAGGAATCAGGGAATTTGTTGTTGAAGTTTTAACACTTAGTTTAGCAGAACACCCAAATCTTGTCAAGTTATTAGGGTTTTGTGCTGAGGGGGAGCAGAGACTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAACCATTTGCATGATCTTTCTCCTGGACAAAAACCACTGGATTGGAACACAAGAATGAGAATAGCTGCTGGTGCAGCCAGGGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTTATATACCGCGACCTCAAATGCTCCAACATTTTGTTAGGCTCTGATTATCATCCCAAGTTATCTGATTTTGGCCTGGCAAAAGTAGGCCCAATTGGTGATAAGACCCATGTTTCAACAAGAGTTATGGGCACATATGGCTACTGCGCTCCCGATTACGCAATGACGGGTCAATTAACATTCAAGTCTGACATTTATAGCTTTGGTGTAGTTCTTTTGGAGATCATCACCGGCAGAAAGGCCATCGACAATAGAAAACCTCATAAAGAACAAAACCTAGTTGCATGGGCAAGGCCGCTATTCAGAGACCGAAGAAGATTCTCTGAAATGGTAGATCCATTGCTTGAAGGTCATTATCCAGTGAGGGGTTTGTACCAAGCTCTTGCTATTGCTGCTATGTGCGTTCAAGAGCAGCCTAATATGCGGCCAGTTATATCCGATGTTGTCACAGCTCTAAATTACCTTGCTTCGCAAATATATGATCCGCAAATTCATCCGATACAAAGATCAAGAAAAGGTTCATCTTCTCCGAGAATTAGGAGTGAAGGTCATAGACGTGTTTCTAGTAATGACTCCGAGACAGACAGATTCGGAGATTAG 1248 0.4046 MSCFRFKSKSREKIEINNNSSRREKHSNITSADKVKVDLNLNLSVMKDKNEDDSKHDQLSLDVKNLNLKDGVTTDGKVAKTFTFDELKAATENFRADCFVGEGGFGKVYKGYLEKVNQVVAIKQLDPNGLQGIREFVVEVLTLSLAEHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSPGQKPLDWNTRMRIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGSDYHPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDNRKPHKEQNLVAWARPLFRDRRRFSEMVDPLLEGHYPVRGLYQALAIAAMCVQEQPNMRPVISDVVTALNYLASQIYDPQIHPIQRSRKGSSSPRIRSEGHRRVSSNDSETDRFGD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0617 415 MobiDBLite consensus disorder prediction 391 415 - -
Mal4g0617 415 SUPERFAMILY Protein kinase-like (PK-like) 80 388 IPR011009 -
Mal4g0617 415 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0617 415 Gene3D Transferase(Phosphotransferase) domain 1 171 384 - -
Mal4g0617 415 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Mal4g0617 415 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0617 415 PANTHER OS07G0668900 PROTEIN 5 401 - -
Mal4g0617 415 Pfam Protein tyrosine and serine/threonine kinase 100 366 IPR001245 GO:0004672|GO:0006468
Mal4g0617 415 CDD STKc_IRAK 100 369 - -
Mal4g0617 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mal4g0617 415 MobiDBLite consensus disorder prediction 382 415 - -
Mal4g0617 415 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 5 401 - -
Mal4g0617 415 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0617 Mal-Chr4 6319584 6322383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0617 1 373 Glycoside Hydrolase AT3G07070 57.105 4.81e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal4g0617 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0617 - - gmx:100794680 645.58