Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0616 ATGGCAAGAAATTTTATTGACGATGAAAGTGAAGATGATTCGAAACTTGATCAACTTTTGGACAAGAAGATCGAAAGCAACGATTCTAGCCGTAGAGAGAAGCACAATAAGGTTAATGTTGATTTGAATTTGAATGTGAGTGAGAAAAGGGAAGATGGTTCTAAACACTACCAACATTCCTTGGGCGTGAACAATTTGAATTTAATAGATGGGGCTTCCTTGGAAGGAAAAGTTGCAAAGCCATTTACTTTTGATGAGCTTGCAGCTGCAACAGGGGATTTTAGGGCAGATTGCTTTCTTGGTGAAGGAGGATTTGGCAAGGTTTATAAGGGTTACATCGAGAAAATTAATCAGTTTGTTGCAATAAAGCAACTTGACCCTAATGGAGTTCAAGGAACCAGAGAATTTCTTGTTGAAGTGTTAACACTTAGTTTGGCAGAACACCCAAATCTTGTCAAGTTATTAGGATTTTGTGCTGAGGGAGAGAACAGGCTTTTGGTTTACGAGTACATGCCTTTGGGATCTTTGGAGGATCATTTGCATGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATCTACCGTGACCTAAAATGCTCAAACATTTTGTTGGGCGATGATTTTCATCCCAAGTTATCTGATTTCGGCTTGGCAAAAGTAGGTCCAATGGGTGATAAGACTCATGTTTCGACAAGAGTAATGGGAACATATGGGTACTGTGCTCCGGATTATGCAATGACAGGTCAATTGACGTTCAAGTCTGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTCATCACAGGCAGAAAGGCCTTTGACCATACAAAACCTGTTAGAGAACAAAATCTAGTCGCATGGGCAACTCCGTTATTCACTGACCGGTCAAACTTCTCAAAGATGGTGGATCCATTGCTTGAAGGTCAATATCCAAAAAAGGGTTTGTACCATGCTCTTGGTATTGCTGCTATGTGTGTTCGAGAGCAGGCTAATACGCGGCCGGTTATAGCGGATGTGGTCCCAGCTCTAAATTACATTGCTTCACGAAAATATGTTCCACAAGTTCATCCAATACAAAGATCGAGATATGGTTCATGTGCTCCAAGAAGCTGTAGGAATGACGGTCATAGATGCGTTACTAGCAATGACTCTGAGACAGACAAATTGGGAGACTAG 1182 0.4112 MARNFIDDESEDDSKLDQLLDKKIESNDSSRREKHNKVNVDLNLNVSEKREDGSKHYQHSLGVNNLNLIDGASLEGKVAKPFTFDELAAATGDFRADCFLGEGGFGKVYKGYIEKINQFVAIKQLDPNGVQGTREFLVEVLTLSLAEHPNLVKLLGFCAEGENRLLVYEYMPLGSLEDHLHGLEYLHDKMKPPVIYRDLKCSNILLGDDFHPKLSDFGLAKVGPMGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVALLELITGRKAFDHTKPVREQNLVAWATPLFTDRSNFSKMVDPLLEGQYPKKGLYHALGIAAMCVREQANTRPVIADVVPALNYIASRKYVPQVHPIQRSRYGSCAPRSCRNDGHRCVTSNDSETDKLGD* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0616 393 SUPERFAMILY Protein kinase-like (PK-like) 80 364 IPR011009 -
Mal4g0616 393 ProSiteProfiles Protein kinase domain profile. 94 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0616 393 Gene3D Transferase(Phosphotransferase) domain 1 171 362 - -
Mal4g0616 393 MobiDBLite consensus disorder prediction 1 35 - -
Mal4g0616 393 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Mal4g0616 393 SMART serkin_6 94 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0616 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mal4g0616 393 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 23 374 - -
Mal4g0616 393 PANTHER OS07G0668900 PROTEIN 23 374 - -
Mal4g0616 393 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Mal4g0616 393 Pfam Protein kinase domain 180 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0616 Mal-Chr4 6296367 6299044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0616 78 350 Glycoside Hydrolase AT3G07070 58.446 1.79e-124 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal4g0616 Pkinase 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0616 - - mtr:MTR_2g095920 554.288