Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0614 ATGGTTAAAGAGAATTTCAACATCTCTGGTCGTTTTGTTCGACTTAAAAGACCAACAAATAATTTTTATCAAGAGAATATTATCCCGGTTGTTCTACTTATTGTCGTGGACGAGTATCCAAATGAAGAAAGACCAAGAACTGATCAAGAGATGATAGAAGAGTCTTTGCAAATTGTAAGAACGATTCCTGCATCCAATGAAGCCATCTCGTCTTTGAAAGCCTACTCACTACCTAAAGATTGTTGCATCTGCATGGAGAGGTTTCATGAAGAATTGGAAAAAGATGGTGATGATAGTGATGACGTGAAGGTTTCAACAATGGCATGCGGTCATGTATTTCACTATAATTGTATTGTAAAGTGGCTACAAACAAGTCATGTATGCCCCTTGTGCCGTTATGCTATGCCTACTTGA 414 0.3792 MVKENFNISGRFVRLKRPTNNFYQENIIPVVLLIVVDEYPNEERPRTDQEMIEESLQIVRTIPASNEAISSLKAYSLPKDCCICMERFHEELEKDGDDSDDVKVSTMACGHVFHYNCIVKWLQTSHVCPLCRYAMPT* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0614 137 SUPERFAMILY RING/U-box 80 135 - -
Mal4g0614 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 137 IPR013083 -
Mal4g0614 137 ProSiteProfiles Zinc finger RING-type profile. 81 132 IPR001841 -
Mal4g0614 137 Pfam RING-H2 zinc finger domain 80 132 IPR024766 GO:0008270
Mal4g0614 137 PANTHER F6A14.12 PROTEIN-RELATED 48 137 - -
Mal4g0614 137 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 48 137 - -
Mal4g0614 137 SMART ring_2 81 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0614 Mal-Chr4 6288485 6288898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0614 49 136 C3H Transcription Factor Family AT1G18760 34.021 1.36e-12 60.8