Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0613 ATGCATGTGCGATTTTGTTTGATTTCTATCCCTCACTTGTTCTTTGTTTGTATGTTTTTTTCTTTGTTTTGTATGTTTTTTTTTGTAGATGTTGAAAGTGATGATGAAAGAGAAGATGATTCTAAACAACATCTACTTTCCTTGGATGTGAGGAGTTTGAAATTAAAAGATGGGGTTTCGACGGATGGAAATGTTTCAAAGAAATTTACTTTTAATGAGCTTGCAGCTGCAACAAGGAATTTCACGGCAGATTGCTTTGTTCGTGAAGTAGGGTTTGGAAAGGTTTATAAAGGTTACATCGAGAAAATAAACCAGGTTGTTGCAATAAAGCAACTTGACCCTATTGTGCTTCAAGGAAAAAGGAAATTTGTTGCTGAAGTGTTAAGACTCAGTTTAGCAGAACACCCAAATCTTGTCAAGTTAATTGGGTTTTGTGCTGAGAGAGAGCAGAGGCTATTGGTTTATGAGAACATGCCATTAGGATCTTTGGAGAACCATTTGCATGATCTTTCACCCGGAAGAAAACCGCTGGACTGGAATACAAGAATGAAAATAGCTGCTGGTGTAGCTAGAGGTTTGAAGTATTTGCATGATGAAATGAAGCCTCCCATCATATACCGTGAGCTCAAATGCTCAAACATTTTGTTAGGCGAAGATTATCATCCCAAGTTAACTGATTTTGGCTTTGCAAAAGTAGATCCAATTGGTTCTACAAGTGTTATGTACTCATATGGGTACGGTGCTCTGGATTACGCAATGATGGGTCCATTGACAATCAAGTCTAACATTTATAGCTTGGGTGTTGTTCTTTTGGAGCTCATTACAGGCAGAAAGTCCATCGATTATAGAAAACCTGCTAATGAACAAATTCTAGCTGCATGGGCAAGGCTGTTATTCAGAGACCAAAGAATCTACGAGATGGTGGATCCATTGCTTGAAGGTCAATATCCAGTGAGGAGTTTGTACCAGGCTCTCTCTGTTGCTGTTATGTGTGTTCTGGAGGAGCCTGAGGAGCGGCCTTTTATAGCCGATGTGGTCACAGCTTTGAATTACATTGCTTCATTTAAATACGATCCACAAGTTCATGGGATACAAAGCTCGAGAAAAGGTTCCTCTTGA 1119 0.3923 MHVRFCLISIPHLFFVCMFFSLFCMFFFVDVESDDEREDDSKQHLLSLDVRSLKLKDGVSTDGNVSKKFTFNELAAATRNFTADCFVREVGFGKVYKGYIEKINQVVAIKQLDPIVLQGKRKFVAEVLRLSLAEHPNLVKLIGFCAEREQRLLVYENMPLGSLENHLHDLSPGRKPLDWNTRMKIAAGVARGLKYLHDEMKPPIIYRELKCSNILLGEDYHPKLTDFGFAKVDPIGSTSVMYSYGYGALDYAMMGPLTIKSNIYSLGVVLLELITGRKSIDYRKPANEQILAAWARLLFRDQRIYEMVDPLLEGQYPVRSLYQALSVAVMCVLEEPEERPFIADVVTALNYIASFKYDPQVHGIQSSRKGSS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0613 372 PANTHER OS07G0668900 PROTEIN 39 370 - -
Mal4g0613 372 Gene3D Transferase(Phosphotransferase) domain 1 158 364 - -
Mal4g0613 372 ProSiteProfiles Protein kinase domain profile. 81 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0613 372 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 39 370 - -
Mal4g0613 372 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Mal4g0613 372 Pfam Protein kinase domain 92 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0613 372 SUPERFAMILY Protein kinase-like (PK-like) 67 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0613 Mal-Chr4 6263136 6265167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0613 56 354 Glycoside Hydrolase AT3G07070 52.131 1.64e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal4g0613 Pkinase 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0613 - - mtr:MTR_2g095920 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0613 4 6263136 6265167 Mal4g0613 4 6263136 6265167 ECH
Mal3g1827 3 77078477 77081922 Mal4g0613 4 6263136 6265167 ECH
Mal7g0675 7 18105339 18112190 Mal4g0613 4 6263136 6265167 ECH