Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0611 ATGCCAGGAGGAAGAGTTGAGTCCTTTTTTGAGGTTTTGTTTAACCAACAAAACATGAACCCCACATACTCATCAGATTCCTTTAGGTTTGATGTCTCCGTTATCCTTAGAAATTGTTCAAATCCTCTTGTGACGGTATCATCCACGTTTAGAAAACAAATATATATAAATTGCACCACGTTCTTCAACAACAACCATAATTTCCTTTGGTCTTTCCTAGGTCGAATACCCTCACCTTATTTCACTCATCAAAACGTTGCTCAATTGTCACAAAGTCTTATACCTATCGTTAAAGAAAAATTCAACATCTCTGGTCCTTTTGTTAGACTTAAAAGACCAAGGAATACTTTTCATCAAGAGAATATTATCCCGGTTACTCTACATGTTTTCGTGAACGAGTATCCAACTGAAGAAAGACCAAGAACTGATCAAGAGATGATAGAAGAGTCTATGCAAACTGTAAGAACGATTCCTGCATCCAATGAAGCCATCTCGTCTTTGAAAGCCTATTCACTACCTAGAGATTGTTGCATCTGCATGGAGAGGTTTCATGAAGAAGATGGTGATGATAGTGATGATGTGAAGGTTTCAACAATGGCATGTGGTCATATATTTCACTATAATTGTATTGTAAAGTGGCTACAAACAAGTCATGTTTGCCCCTTGTGCCGTTATGCTATGCCTACTTGA 690 0.3768 MPGGRVESFFEVLFNQQNMNPTYSSDSFRFDVSVILRNCSNPLVTVSSTFRKQIYINCTTFFNNNHNFLWSFLGRIPSPYFTHQNVAQLSQSLIPIVKEKFNISGPFVRLKRPRNTFHQENIIPVTLHVFVNEYPTEERPRTDQEMIEESMQTVRTIPASNEAISSLKAYSLPRDCCICMERFHEEDGDDSDDVKVSTMACGHIFHYNCIVKWLQTSHVCPLCRYAMPT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0611 229 Pfam Ring finger domain 175 224 IPR001841 -
Mal4g0611 229 SMART ring_2 176 223 IPR001841 -
Mal4g0611 229 PANTHER F6A14.12 PROTEIN-RELATED 120 229 - -
Mal4g0611 229 SUPERFAMILY RING/U-box 175 227 - -
Mal4g0611 229 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 120 229 - -
Mal4g0611 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 229 IPR013083 -
Mal4g0611 229 ProSiteProfiles Zinc finger RING-type profile. 176 224 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0611 Mal-Chr4 6255741 6256430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0611 144 228 C3H Transcription Factor Family AT1G18760 34.043 4.64e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0611 - - gmx:102665306 130.183