Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0610 ATGGCAGAAGAAAGAGTTAAGCACAGTTTTTTTGTTTCTAACGTGGAATCAAGCCATCAACCTACATACTCAACAGATTTCTTTAGGTTTGATGTCACTGCTATCCTTCGAAAACGTTCAAATCCTCAAAGTCGTCTTATGAGAATATCAACCATGTTTGAAACATCAATATATATAAATTGCGATCGTTTCTTTGAACACAATCAAAATTTTCTATGGCTTTACTTACGCCAATTCGCCTCGCCCTATTTTACTCCTGAAAACCTCGGAGAAATCACAACCAATCTCATAACTAAAGTGAAACAATTGTTTGGCATCTCCGATTTTTCTCCGAAACCAACTACTATTCGTCGAGAGAACATTCTGGTGGTTCTAGATATTATCTTGGACGTGTATCCAAATGAAGAAAGAAGAATTGGTCAGGAGATAAAAACAATTCCGGCATCCAATGAAGCCATCTTGTCTTTGAAAGCCTACTCATTTCCTAAGAGTTGTTGCATCTGCATGGAGAGGTTTCATGATGATTTAGAAGAAGATGGTGGTGATAGTGATGACGTGAAGATTTCAACAATGGCATGCGGTCATGTATTTCACTATAATTGTATTGTAAAGTGGCTACAAACAAGTCATGTATGCCCTTTATGCCGTTATGCTATGCCTACTTGA 666 0.3754 MAEERVKHSFFVSNVESSHQPTYSTDFFRFDVTAILRKRSNPQSRLMRISTMFETSIYINCDRFFEHNQNFLWLYLRQFASPYFTPENLGEITTNLITKVKQLFGISDFSPKPTTIRRENILVVLDIILDVYPNEERRIGQEIKTIPASNEAILSLKAYSFPKSCCICMERFHDDLEEDGGDSDDVKISTMACGHVFHYNCIVKWLQTSHVCPLCRYAMPT* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0610 221 SMART ring_2 165 215 IPR001841 -
Mal4g0610 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 221 IPR013083 -
Mal4g0610 221 Pfam RING-H2 zinc finger domain 164 216 IPR024766 GO:0008270
Mal4g0610 221 SUPERFAMILY RING/U-box 164 219 - -
Mal4g0610 221 PANTHER F6A14.12 PROTEIN-RELATED 101 221 - -
Mal4g0610 221 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 101 221 - -
Mal4g0610 221 ProSiteProfiles Zinc finger RING-type profile. 165 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0610 Mal-Chr4 6251138 6251803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0610 157 220 C3H Transcription Factor Family AT1G18760 37.500 6.11e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0610 - - gmx:102665086 146.362