Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0609 ATGGAGCATTTAAAGAAATCACCATCATCTTCATCTTCCAGACCATCGTTTCCGAGAGATCCTCGCGGATCCCTCGAAGTCTTCAATCCAACAAGCAACTCAACCTCACCGGTACGTTCTCCGTCAACTTGGACGGAAACGGAAGAGCAACGCAACGATTCCATATACGCCGATGAAGTCACCATCAGCAACACTTCATGGATGGCAATCAAGGAAGGAGAAACCGGTGCGGCGGCGCAGAGAGCTGCTGAGTGGGGTTTGGTCCTCAAAACTGACGCGGAGACCGGAAAACCGCAGGGAGTGGCGGTTAGAAACTCCGGTGATGATGAACAGAATGGAAAACAAGCCGGAAAAAGGAATTCGAATAACTCCGGTAGAGTTTCCGGTGACTCTTCCGACGGAGGTGATCCACGCGGGTTTCCGAGAGTTTCGGAGGATTTGAAAGATGCTTTATCGGCTTTTCAACAAACTTTTGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCAAGTGCGGGTTTCTTCAAAATGACGGGTTATACTTCAAAAGAAGTCATAGGAAGAAACTGTCGGTTTTTACAGGGTGCGGATACAGATCCAGAAGATGTGGCAAAGATAAGGGAAGCGTTGGAAGGTAGGAAAAGTTATTGTGGAAGGTTACTGAACTACAAGAAGGATGGAACTCCATTTTGGAATCTTCTCACTATTTCACCCATCAAGGATGATGATGGCAATGTGCTCAAGTTAATTGGAATGCTGGTGGAGGTGAACAAGCATACGGAGGGGTCCAAGGAGAAGAATTTACGTCCCAATGGGTTGCCTGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAACATCTTCTGTATCTGAGTTACTACAAGCCATGAAGCGCCCCCGTGCACTCAGTGAATCCGGTCAACGTCCCTTTATCAGAAAATCAGGAGGAGGCTCTGAAGAAGATGAAGTGGCAGAGAAAGTAGAGAACAAATCAAGGAGAAACTCTGATAGTGTAGCTTCTTTTAGACCAAAATCACAAAGAAAAAGTAGAAGTTCAATGGAACGAATCAGTGAACTACCTGAAAATACACACAAAGATTCTCAGCGCCGTTCTTTCATGGGATTCAGGAGGAAAAGTCAGTCCATTGATGAAAGCATCAATAATGAAGTTATAGTAGATGTCAGTTCTGAGAGTGAGGATGATGACGGAGATGATAGTTTTGAATTTGATGGCAAAGTAAAGCTGAGGGAAAAGCGAAAAGGTCTTGATCTTGCTACTACACTTGAGCGTATTGAGAAAAACTTTGTCATTACTGATCCAAGGCTTCCTGACAATCCTATAATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCAGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAACCGAAGTTACCGTGCAACTAATCAATTATACAAAGAGTGGGAAAAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCATAAGGGAGAAGTACAATACTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCACAACTGCATTAAAGAAGATACTGCAAAGGAGGGAGAACAATTGGTCAAACAAACTGCTGAAAATGTTGGTGAGGCCGTGAGAGAACTTCCGGATGCTAACCAGAAACCAGATGATTTGTGGATGAACCATTCGAAAGTGGTTCGCCCCAAACCTCATAGGAAGGATGATGATGCTTGGAAAGCAATCCAGAAGATTGTAGAAAGCGGAGAACAGATAGGCCTAAAGCACTTTAGGCCAATTAAACCTTTGGGATCTGGAGACACTGGAAGTGTGCATCTGGTGGAGCTAGAAGGAACTGGTCAATACTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGCAATAAGGTGCATAGAGCTTGCACTGAAAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATGTTTGTTTGATAACTGATTACTATTCTGGTGGAGAACTATTCCTGCTTCTTGACCAGCAGCCAACTAAGGTTCTCAAGGAAGATGCTGTGAGATTCTATGCTGCTGAGGTATTGATTGCATTGGAGTACCTTCATTGTCAAGGCATAATTTATCGGGATTTGAAGCCAGAAAATGTGTTGATCCAGAGCAATGGACATGTGTCTCTAACAGATTTTGATTTGTCGTGTTTAACATCTAGCAAGCCACAGCTTATACTTCCAGCTACAGAGGAAAAGAAGAAGAGGAAGAAGAAAAAGAAAAAGGGACAACAGAAAAGTCAACAAGTTCCCATGTTTATGGCTGAACCAATGAGAGCGTCCAATTCTTTTGTTGGCACCGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCTGTAGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTTTATGGATACACACCATTCAGGGGAAAGACAAGACAAAAGACATTTGCAAATATTCTTCACAAAGATCTTAAATTTCCCAAAAGCAAACCGGCAAGTCCCCAAGCAAAGCAGCTAATTTACTGGTTGCTGCACAGAGATCCCAAAAACAGATTGGGTTCACTTGAAGGAGCAAATGAAATTAAGCGCCATCCATTCTTCAAGAATGTCAATTGGGCTCTAATTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTATCTTACTGGAAAATGATGAAAAGAAAGAAGCGAATGATATCGACCCTGGCCTAGATGATCTACAGAAAAATGTTTTCTGA 2904 0.428 MEHLKKSPSSSSSRPSFPRDPRGSLEVFNPTSNSTSPVRSPSTWTETEEQRNDSIYADEVTISNTSWMAIKEGETGAAAQRAAEWGLVLKTDAETGKPQGVAVRNSGDDEQNGKQAGKRNSNNSGRVSGDSSDGGDPRGFPRVSEDLKDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALEGRKSYCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLVEVNKHTEGSKEKNLRPNGLPESLIRYDARQKEKATSSVSELLQAMKRPRALSESGQRPFIRKSGGGSEEDEVAEKVENKSRRNSDSVASFRPKSQRKSRSSMERISELPENTHKDSQRRSFMGFRRKSQSIDESINNEVIVDVSSESEDDDGDDSFEFDGKVKLREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIKEDTAKEGEQLVKQTAENVGEAVRELPDANQKPDDLWMNHSKVVRPKPHRKDDDAWKAIQKIVESGEQIGLKHFRPIKPLGSGDTGSVHLVELEGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYYSGGELFLLLDQQPTKVLKEDAVRFYAAEVLIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSSKPQLILPATEEKKKRKKKKKKGQQKSQQVPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPASPQAKQLIYWLLHRDPKNRLGSLEGANEIKRHPFFKNVNWALIRCMKPPELDAPILLENDEKKEANDIDPGLDDLQKNVF* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0609 967 MobiDBLite consensus disorder prediction 1 57 - -
Mal4g0609 967 MobiDBLite consensus disorder prediction 787 807 - -
Mal4g0609 967 SUPERFAMILY PYP-like sensor domain (PAS domain) 442 541 IPR035965 -
Mal4g0609 967 ProSiteProfiles PAC domain profile. 500 554 IPR000700 -
Mal4g0609 967 MobiDBLite consensus disorder prediction 105 130 - -
Mal4g0609 967 MobiDBLite consensus disorder prediction 96 143 - -
Mal4g0609 967 ProSiteProfiles PAS repeat profile. 143 214 IPR000014 -
Mal4g0609 967 MobiDBLite consensus disorder prediction 303 384 - -
Mal4g0609 967 Pfam Protein kinase domain 629 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0609 967 CDD PAS 170 259 IPR000014 -
Mal4g0609 967 SUPERFAMILY PYP-like sensor domain (PAS domain) 164 256 IPR035965 -
Mal4g0609 967 Gene3D PAS domain 157 313 - -
Mal4g0609 967 TIGRFAM sensory_box: PAS domain S-box protein 170 263 IPR000014 -
Mal4g0609 967 TIGRFAM sensory_box: PAS domain S-box protein 451 541 IPR000014 -
Mal4g0609 967 ProSiteProfiles Protein kinase domain profile. 627 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0609 967 MobiDBLite consensus disorder prediction 320 343 - -
Mal4g0609 967 CDD STKc_phototropin_like 625 941 - -
Mal4g0609 967 MobiDBLite consensus disorder prediction 353 383 - -
Mal4g0609 967 Gene3D Phosphorylase Kinase; domain 1 626 710 - -
Mal4g0609 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Mal4g0609 967 SUPERFAMILY Protein kinase-like (PK-like) 612 939 IPR011009 -
Mal4g0609 967 Gene3D Transferase(Phosphotransferase) domain 1 711 935 - -
Mal4g0609 967 SMART pac_2 220 262 IPR001610 -
Mal4g0609 967 SMART pac_2 503 545 IPR001610 -
Mal4g0609 967 SMART pas_2 428 497 IPR000014 -
Mal4g0609 967 SMART pas_2 145 214 IPR000014 -
Mal4g0609 967 Gene3D PAS domain 416 579 - -
Mal4g0609 967 CDD PAS 441 541 IPR000014 -
Mal4g0609 967 ProSiteProfiles PAS repeat profile. 426 499 IPR000014 -
Mal4g0609 967 MobiDBLite consensus disorder prediction 26 57 - -
Mal4g0609 967 ProSiteProfiles PAC domain profile. 217 271 IPR000700 -
Mal4g0609 967 SMART serkin_6 627 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0609 967 PANTHER PHOTOTROPIN-1 95 967 - -
Mal4g0609 967 Pfam PAS domain 164 259 IPR000014 -
Mal4g0609 967 Pfam PAS domain 449 541 IPR000014 -
Mal4g0609 967 PANTHER FLIPPASE KINASE 1-RELATED 95 967 - -
Mal4g0609 967 ProSitePatterns Protein kinases ATP-binding region signature. 633 656 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0609 Mal-Chr4 6229919 6243494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0609 1 967 AGC Kinase Gene Family AT3G45780 68.374 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal4g0609 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0609 K20715 - gmx:100817565 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0609 4 6229919 6243494 Mal4g0609 4 6229919 6243494 ECH
Mal4g0609 4 6229919 6243494 Mal7g2176 7 77690281 77708321 PCT