Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0605 ATGTATGCACACTACTCTAATTCCAACAATATTCAATTCTCAACACCCTTTCTTCTTCCCTCTTCTTCTCCATTTATGGAACAAAACAGCTCCATCACTGATTTCACCGAATTCGACTCGTTCCAAGACACTCTCTCCCAGCTTAATAACTCGGAGTTGAGCAGTGGCTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCCATCTTGATGCAGAGAAGCATTAGCAGTCATTCCCTTCAGTACAATAATGGGACCCGCCATCATCCCTTCTCTGCTTTTTTTGCTGAGTTGCTCGAATCGGAAGATGCTCCCGTGAGGAAAGTTTGCAGTACTGGCGATCTACAGAGGATTAATGGAATGCAACATAATCATCATCACGTGGATAGTCCATTGTCTAGTGAAAGTAGCATGATCATAGAAGGTATGAGCAGAGTTTCTCCATATAGTCCAGAAGAAAAGAAAGTGAGAATTGAAAGATATAGAAGAAAGAGAAATCAGAGAAACTTCAACAAGAAAATTAAGTATGTTTGCAGAAAGACATTGGCAGATAGGAGGCCACGGATAAGAGGACGGTTTGCGAGGAATGATGAAATTGATAACAAACCTACAGTTGAGTGGAGCCATAATGGTGGTGGGGAGGAAGAGGATGAAGAAGATGAGAATTGGATCAATATCTTTGATTCCATAGTTGCTGCAAATCTTGTTCATGATGAGTTTCAAGGAAGTTCCTCCTTTGGTCTATTATATTAG 756 0.4114 MYAHYSNSNNIQFSTPFLLPSSSPFMEQNSSITDFTEFDSFQDTLSQLNNSELSSGYSSYGGSPSPSTPILMQRSISSHSLQYNNGTRHHPFSAFFAELLESEDAPVRKVCSTGDLQRINGMQHNHHHVDSPLSSESSMIIEGMSRVSPYSPEEKKVRIERYRRKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDNKPTVEWSHNGGGEEEDEEDENWINIFDSIVAANLVHDEFQGSSSFGLLY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0605 251 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Mal4g0605 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 11 251 IPR045281 GO:0009909
Mal4g0605 251 Pfam CCT motif 157 197 IPR010402 GO:0005515
Mal4g0605 251 PANTHER CCT MOTIF PROTEIN 11 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0605 Mal-Chr4 6128301 6131884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0605 151 201 C2C2-CO-like Transcription Factor Family AT5G15850 47.059 1.16e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal4g0605 CCT 1.3e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0605 - - gmx:100820236 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0605 4 6128301 6131884 Mal4g0605 4 6128301 6131884 ECH
Mal4g0605 4 6128301 6131884 Mal7g2181 7 77863909 77867005 PCT