Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0560 ATGGGAAAACAATTGAATACTTCGGAGCAATCCAGTGTTCAAATTCAAGAAGTTAATCAAGGATGCATGTGGGGCATGTTTCATATTCTTGATTACCATCATTGGGGTGTCAAAAGGGTGTTTCATCATAAAAAGAAAAGACATGCCAGATATAAGAAAAAGACCACTTTACAAGACCAACAAAATGTAGTTACAGATGCAGAATCCCTCTTGGTAAGTCAACATAGAGAAATATCAAATGCTAAAGGTCAGGTTAGTAGTGGGAATGCACTTCATCAGAAGAAAGATGGCAAGACAACAAATCAAGGTTCCCTTAACAGAGACATTTCTATTAAATTTAAGAACCAAGATGATGTTTTGGAGGTAATTAGTGTGGAGAAGAATATATTACTCAAATTTCTTAGAGATATAGACATTGGTGGTAAAAAGATCCATCAAGCTTCTCACAACAAAGCAAAATTGACTAAATCAGGATCATTTCCTTTAACCGCACCTTCTACGACGAAAAACATTAGCTCTAGTACTTTCCGGTCCAAGCAAACCGAAATTTGGGACTTTCCCAAGGGAGAAAAGTTGCTTGCTGGAACTCAGGCACCAAAAAAGTTTGGATGCAGTTTAGTGGAAGATGTTTCTTATGAAACTCCGAAGCCTTCAGCGAGTGATCTTGAAATCGATCGTGCCATTTCCGTGCAAAAGAAGCCAAGCATTTCTTCAAGGCCTTCTGAAGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAACTATAAAACAGAAGATAAAGCATGCACTTGTGGAATTCAAGAAAAGTGGTCACCAAACATCTGTTGAAGCTATCCACAATAATGAGAAAGAGATCTCACAAAGCTTAGACGATGGCGCGATTCAAGAATTCAAAAAGAGTAAAAGTTTGAGTGAGACTAAAGCTTCTGATTCCAACAAAAGTGATGTTCACCTTATGCGAAGAACGTCCTCTCTTAATGAATCGATGGATAGATATACTCAGTTGTTTGAGAAAAGTATGAGCAAAGAGATCAAGTGGCAAAACTCAAAGTCTAAAAGCTTAAGATTGACAAATGATGATAAGATTCATAAGAGTAGGCATGCTCCTACGTTTTCTAGAAGTAATTTGTCTATGCCTAATCTCGAGTCTATAGGATTCTTTTTACATGAAGTTCTTCTTGATACAAATGAAGCAAATAATACAGTGGAAAGTGATAATGATGTTCAACGTAAATCAGTGAGCATTCCTTTAAAGATTAATAAATCACTTGAACATTTTAAAGAGGCTGAAATTGATGAAACTGTTGAAGGGGGTGGCAGAGATGTGGAAACAAGCATTGAGCCAGCAGAAGAAACAAGCATGACTACTTACCTTAGCAAGGAGGTAACAACATCACTTGAAACTAGCTGTCTAGACAGTACAATCAGCCAAGCAGAAGGAAAAGAATTGAATACACGAGGCTCAAATGCTAGTGTAACAGACAAAGACACAAACAATAGTCTTGAAAATCCTTTCTTGCACTTCAAGTCATATTCAGAAAACGATTCCAATTTCAAATATGTGAAAGACATTCTTGAATTTTCGGGTTTCATGCAAAATGAGCAGACTCGAATGCGATACACAGTAGACCAGCCAATGAAACCATCGTTATTCACAGCATTGGAAGAAATTTTACTTCATGAAAATGAGTATTCTGAAGAAGGGAACATCAACCTTTGTGATCACCAACTTCTTTTTAACTTGGTTAATGAAGTACTCTTTCAAATATATGAGAAATCACCAACTTACTTTCCAAGACCGTTCGCCTTTAACTACAAACTCAAACCAATGCCTAAAGGGAACTATCTTGTTAAAGAAGTATGGGACAATGTTAGTTCATATTTGAGGTTGAGACCAGAGTTAGATCAGACATTAGACGATGTTGTTGGTCGTGATTTGACAAAAGGAAGTGGCTGGATGAACCTTCAACAAGAAGAGGAGTGTGTAGCACTTGAACTAGAGGAAATGATCATAGATGATTTATTAGATGAAATTCTCTTCTCATGA 2061 0.3678 MGKQLNTSEQSSVQIQEVNQGCMWGMFHILDYHHWGVKRVFHHKKKRHARYKKKTTLQDQQNVVTDAESLLVSQHREISNAKGQVSSGNALHQKKDGKTTNQGSLNRDISIKFKNQDDVLEVISVEKNILLKFLRDIDIGGKKIHQASHNKAKLTKSGSFPLTAPSTTKNISSSTFRSKQTEIWDFPKGEKLLAGTQAPKKFGCSLVEDVSYETPKPSASDLEIDRAISVQKKPSISSRPSEGLNHKGWNQVVIHQFKTIKQKIKHALVEFKKSGHQTSVEAIHNNEKEISQSLDDGAIQEFKKSKSLSETKASDSNKSDVHLMRRTSSLNESMDRYTQLFEKSMSKEIKWQNSKSKSLRLTNDDKIHKSRHAPTFSRSNLSMPNLESIGFFLHEVLLDTNEANNTVESDNDVQRKSVSIPLKINKSLEHFKEAEIDETVEGGGRDVETSIEPAEETSMTTYLSKEVTTSLETSCLDSTISQAEGKELNTRGSNASVTDKDTNNSLENPFLHFKSYSENDSNFKYVKDILEFSGFMQNEQTRMRYTVDQPMKPSLFTALEEILLHENEYSEEGNINLCDHQLLFNLVNEVLFQIYEKSPTYFPRPFAFNYKLKPMPKGNYLVKEVWDNVSSYLRLRPELDQTLDDVVGRDLTKGSGWMNLQQEEECVALELEEMIIDDLLDEILFS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0560 686 PANTHER PROTEIN TRM32 1 90 - -
Mal4g0560 686 MobiDBLite consensus disorder prediction 304 322 - -
Mal4g0560 686 MobiDBLite consensus disorder prediction 304 327 - -
Mal4g0560 686 PANTHER PROTEIN TRM32 99 686 - -
Mal4g0560 686 Pfam Domain of unknown function (DUF4378) 523 682 IPR025486 -
Mal4g0560 686 PANTHER PROTEIN TRM32 99 686 IPR044257 -
Mal4g0560 686 MobiDBLite consensus disorder prediction 80 103 - -
Mal4g0560 686 PANTHER PROTEIN TRM32 1 90 IPR044257 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0560 118 676 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.611 6.89e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0560 - - mtr:MTR_2g096870 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0560 4 5484939 5487893 Mal4g0560 4 5484939 5487893 ECH