Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0555 ATGGGAGTTTGTTTAAGTGCTCAAATCAAAGCTGAAAGTCCTTTTAACACTGGGTTCAATTCAAAGAATTCAAATTCAGCTGGAAATGATCTGAGCACAAACAGTAAGGTTTCAGCTGCATCTGTGCCTCAGACTCCTCGAAGCGAAGGTGAAATCTTGCAATCATCCAATTTAAAGAGCTATACCTTAGCTGAACTTAAGTCAGCCACTAGAAATTTTCGGCCGGATAGTGTGTTAGGAGAAGGTGGTTTTGGATCAGTGTTTAAGGGTTGGATTGATGAGAATACATTGGTTGCTGCCAAACCGGGTACTGGTATTGTTATTGCTGTTAAAAGACTTAATCAAGAAAGCTTCCAGGGTCACAGGGAATGGTTGGCTGAAGTCAACTATCTCGGACAATTTTCTCATCCTCATTTAGTGAGATTGATTGGTTATTGTCTTGAAGATGAACACCGTCTTCTCGTCTATGAGTTTATGCCCCGTGGAAGCTTGGAGAATCACTTGTTCAGGAGAGGATCATATTTTCAACCTCTTTCATGGAGCCTCCGTCTGAAGGTTGCTCTTGACGCTGCCAAAGGGCTTGCATTTCTGCACAGCGCTGAAACCAAAGTGATATATAGAGATTTTAAGACTTCAAATATCTTGTTGGATTCTGATTATAATGCAAAGCTGTCTGATTTCGGGCTGGCAAAGGATGGTCCAACAGGTGACAAAAGCCACGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGTCATCTTACTACTAAGAGCGATGTCTATAGTTTTGGAGTTGTCCTGCTTGAAATGTTATCCGGTAAGAGGGCAGTTGACAAGAACAGACCATCTGGACAACACAGCTTAGTGGAATGGGCTAAACCCTATCTCGCTAACAAACGTAAGCTTTTCAGTGTGTTAGACAGTCGGCTCGAAGGACAGTATTCATCAGATGAGTCCTACAGGGTAGCCACACTTGCTTTGCGATGCCTATCAACAGAATCCAGGTACAGGCCCAACATGGATGAAGTTGTTAGAATTTTGGAGCAGCTCAAGGTTCCTAATGTGACTGTGGGAAATCGTAAGCGTGCTCGGAGAAAAAGTGCTGATGATGTTAACCGTTTGAGGACTCACACATCTTGTGCTAGTGCGAAGACTCACACATCTCATCCACGCCTCAAGTTGTCTCCTCTCTATACTTGA 1224 0.4363 MGVCLSAQIKAESPFNTGFNSKNSNSAGNDLSTNSKVSAASVPQTPRSEGEILQSSNLKSYTLAELKSATRNFRPDSVLGEGGFGSVFKGWIDENTLVAAKPGTGIVIAVKRLNQESFQGHREWLAEVNYLGQFSHPHLVRLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAETKVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEMLSGKRAVDKNRPSGQHSLVEWAKPYLANKRKLFSVLDSRLEGQYSSDESYRVATLALRCLSTESRYRPNMDEVVRILEQLKVPNVTVGNRKRARRKSADDVNRLRTHTSCASAKTHTSHPRLKLSPLYT* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0555 407 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
Mal4g0555 407 MobiDBLite consensus disorder prediction 366 407 - -
Mal4g0555 407 Gene3D Transferase(Phosphotransferase) domain 1 159 380 - -
Mal4g0555 407 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0555 407 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Mal4g0555 407 SUPERFAMILY Protein kinase-like (PK-like) 48 355 IPR011009 -
Mal4g0555 407 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Mal4g0555 407 MobiDBLite consensus disorder prediction 16 51 - -
Mal4g0555 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mal4g0555 407 PANTHER OS01G0588500 PROTEIN-RELATED 23 381 - -
Mal4g0555 407 PANTHER KINASE 1B 23 381 - -
Mal4g0555 407 MobiDBLite consensus disorder prediction 382 397 - -
Mal4g0555 407 CDD STKc_IRAK 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0555 Mal-Chr4 5408785 5411348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0555 51 355 Glycoside Hydrolase AT3G07070 48.693 8.39e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal4g0555 PK_Tyr_Ser-Thr 9.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0555 - - gmx:100798404 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0555 4 5408785 5411348 Mal7g2278 7 80644929 80647239 PCT