Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0538 ATGTTATTACTCACACTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTCTTCTTCCATCCAGCATCAACAAAACTACAAATTTTGTGCATAGCCCCGACTTCAGTGATAATAGTTTCAGCAGTGGTAGTACTAGCTCCTTTGAACTTGATCAACACAATGAACAAAGTGAGACTGAATTCTCTTCCACTACTGCTCTTGGTTTTATAAACCAATTTCTCATGGAAGAAAACTTTGAAGAAGACTATACTATGTTCCAAGATTCTTTTGCTCTTCAACTTACTCAAAAATCATTTCATGATGTTATTACTCACACTCCTCTTCCTTCTTCTTCTTCCATCCAGCACCAACAAAACTATAATTTTGTGCATAGCACCGACTTCAGTGATTATAGTACTAGCTCCTTTGAACTTGATCCATACAACCCTTTTATTCTCCCAACTACTCTTCCAATTCCTCCTAATAACTTTGTTTCTCAAACCAACTCAACCATTTTCCCTTCTTTCACTAATGTTCTTTCTAATGAGGTAATTAAGACAGAAAACTTTGAAGAAGAGCATTTTCTCAATGTGTCACAAAATGAGTCAGAACAAGTGTATGTAGAGGATAACAATGAGTTATCAGAAATATTTGATAAAGTACTAGTCCTTGGTACTAAATTCACAAACAACAGCTTTCAGCAGAATGAAGAATTATCAAACAGATACTATGGTTCTAGGAGACAAAGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTAATTCTATGTGCACAATCAATATCTTGTAATGATAGTTCAAATGCAAACCAATTATTAAAGCAGATGAAGAAACATTCTTCTACAACAGGTGATGGAACTCAAAGAATGGCACATTTCTTTGGAAATGCACTTGAAGCACGCTTAGCAGGAACTGGTTCAAATATCTATAGAGCATTATCTTCCAAGAAAAAATCTGCTGCAGATATGGTAAGAGCTTACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAATTTGCAATTATTTTCTCAAACGATGCAATTTTGAGTGTAGCAAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTCATGGTTTCAAGTGGCCGGGTTTTATATATCGTTTATCGAAAAGATCTGGTGGGCCACCCAAGTTGAGGATCACAGGGATAGATCTTCCAAATTCGTTGGAGAGTGTGAATGAAACAGGTCTTAGGCTTGCAAGTTATTGCAAACGTTTCAATGTTCCTTTTGAGTTCAATGGTATTGCAAAAAACTGGGAATGTATCAAAGTTGAGGATTTTAAGATAAGGAAAAATGAGTTTGTTGCTGTGAATTGTGTGCTTAAGTTTGAGAAGCTACTTGATGAGACAGTTGTTTTGGAGAATCCGAGGGGTGCTGTTTTGGATTTGATTAAGAAGGTAAATCCGAATATATTTGTTCATGGAATTGTTAATGGTTGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTCATTACTCAGCATTGTTTGATATGCTTGATAACATCAATGTTGAACGTGAGGATCCTATTAGGTTGATGTTTGAGGAAGAGTTTTGGGGGAAGGATATAATGAATGTTATAGCTTGTGAAGGTTGTGATAGGGTTATGAGGCCAGAGACATATAGGCAGTGGCATATTAGGCACATGGAAAATGGGTTTAAGTCTTTGAAATTGGATAAGCAGATTATAGGTAAATTGAAGGGTAGGTTGAGAAATGATGCATATAGTAGTGATTTTGTGTTTGAGGTGAATGAAAATTGGATGCTACAAGGCTGGAAGGGTAGAATACTATTTGGTTCCTCTTGTTGGGTTCCAGCATAG 1866 0.3644 MLLLTLLLLLLLLLFLLLPSSINKTTNFVHSPDFSDNSFSSGSTSSFELDQHNEQSETEFSSTTALGFINQFLMEENFEEDYTMFQDSFALQLTQKSFHDVITHTPLPSSSSIQHQQNYNFVHSTDFSDYSTSSFELDPYNPFILPTTLPIPPNNFVSQTNSTIFPSFTNVLSNEVIKTENFEEEHFLNVSQNESEQVYVEDNNELSEIFDKVLVLGTKFTNNSFQQNEELSNRYYGSRRQRSYEEVVDLRTLLILCAQSISCNDSSNANQLLKQMKKHSSTTGDGTQRMAHFFGNALEARLAGTGSNIYRALSSKKKSAADMVRAYQVYSSACPFEKFAIIFSNDAILSVAKETESLHIIDFGVGHGFKWPGFIYRLSKRSGGPPKLRITGIDLPNSLESVNETGLRLASYCKRFNVPFEFNGIAKNWECIKVEDFKIRKNEFVAVNCVLKFEKLLDETVVLENPRGAVLDLIKKVNPNIFVHGIVNGCYDAPFFVTRFKEAVFHYSALFDMLDNINVEREDPIRLMFEEEFWGKDIMNVIACEGCDRVMRPETYRQWHIRHMENGFKSLKLDKQIIGKLKGRLRNDAYSSDFVFEVNENWMLQGWKGRILFGSSCWVPA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0538 621 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 37 620 - -
Mal4g0538 621 Pfam GRAS domain family 250 618 IPR005202 -
Mal4g0538 621 ProSiteProfiles GRAS family profile. 241 619 IPR005202 -
Mal4g0538 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 620 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0538 Mal-Chr4 5190338 5192203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0538 51 620 GRAS Transcription Factor Family AT2G29060 42.484 5.35e-175 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0538 GRAS 1.4e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0538 - - mtr:MTR_2g097390 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0538 4 5190338 5192203 Mal7g2291 7 80872127 80874331 PCT
Mal7g2292 7 80875756 80877924 Mal4g0538 4 5190338 5192203 PCT