Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0536 ATGGATCCGAACTTTGTCGGATTTGAAACCACCTACAAAATTGATGAACATGGTAACGTAGTTTTTCTCTCTGATCCAAATCCAAACGATAACGATTTCTCCATCACCAACCCTTATGTGGGCCCACCCAATTCAGAACCACTTGTTTCTTCCTCTGATGCAATCACAGATTCTACCTTTGAAGACACTGATTTTTCAGAAACAGTGAAATATATAAGCCAGATTCTAATGGAAGAAGATTTTGAACAAAAACCATGTATGTGTTATGACCCACTTAGTCTTCAACACACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAATTTGCCTCTTTCACCTAATCAACACCCTCTTGATGTTCTTGAGATTCCTGATAGCAATTGTTGTGTTACTGATTCTGGTAATAGTTCTAGTTCTAATGAGTTGAAACCACTTTCACCTGATACACCAGTTTCTGGTGGTGATTCTGGTTTTAATTCAGTTTCAAATGTGAAGTCTCAGTTTATTGTTCCAGATCATGGTTTGTTTTTTAATAATATTAGTGATGGTGTTTTGGATTTGGATTCTTCTGAGACTAGGGTTTTAGCTCAGAATATTTTTAGTGATGCTGATTCTATTTTGCAGTTTAGAAAAGGATTAGAGGAAGCTAGTAAGTTTCTTCCACAAAAAGCTCAGCTTTTTACTGGTTTTGAGAATGCTAATAGTAATAGTTTGATGTCTCATGAGCCTAAGGGTAGGGTTGGAGTGATTAAGATGGAGGGTAGTGTTAGGTCGAATTCGAATTTGAGTTATTCGAGTTCAAATTCGAATTCACATGGTTTTTTGAAGAGTAGAAAGAATCACGAGCGTCAAGAAAGTGACGACGAAGAAGTAAGAAGTAACAAGCAGTCTGCAGTTTGTGTTGAGGAGAGTGAAATATCTGAGATGTTTGATAGGGTTTTGCTTAGTGTCGAAAATGTGCCGTTGTGTGCTGAACAAAAGGATGGATCAGTGGTAGAGAGTAGAACTAAGGTTGGTGAACTTGATGGAGGGAAGGCGCGTTCGAAGAAACAAGGGAAACAAGGGAAACAAGGGAGGAAGAAGGAATCTGTGGATCTGAGGACCCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGCTAATGACAATAGGACTGCAAATGAATTGTTGAAGCAGATTAGGAAGCATTCTTCTCCTTTAGGTGATGCATCACAGAGGATGGCTCATTACTTTGCGAATGCGATCGAAGCGCGCATGGTTGGTGCTGGTACTGGTACACAAATATTATATATGAGCCAAAAGATGTTTAGTGCTGCTGATTTCTTGAAAGCTTACCAAGTTTTTATGGCTGCTTGCCCTTTCAAAAAATTTGCACATTTCTTTGCAAATAAAATGATTATGAAAACAGCTGAAAAGGCAGAAACCCTTCACATTGTTGACTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAAAATAGAGGGTGGACCACCCAAGTTGAGGATCACAGGAATTGAGTATCCCCAAGCTGGTTTTCGACCGGCAGAGAGAATCGAGGAAACTGGCCGGCGTTTGGCTAACTATTGTGAACGTTTCAATGTTTCCTTCGAATACAAGGCCATACCATCGCGAAACTGGGAAACCATTCAAATTGAAGACCTTAATATTAAGAGCAATGAGGTAGTAGCTGTGAACTGTCTGGTAAGGTTTAAGAATTTACATGATGAGACAATTGACGCGAATAGTCCTAAAGATGCAGTTCTGAAGTTAATCAGGAAGATAAATCCGAGTATATTTGTTCAATCCATAATCAATGGATCTTATAATGCCCCTTTCTTTTCCACGCGCTTCAAGGAGTCGCTTTTCCATTATTCTGCAATGTTTGATATGTATGATACTATCATATCCCGTGAAAATGAATGGAGGTCGACAATTGAGAGAGAGTTTTTGGGCAGGGAGATTATGAATGTCATAGCATGTGAAGGTTTAGAGAGGGTTGAAAGGCCTGAGACTTACAAACAGTGGCAGGTTAGGAACACCAGGGCCGGTTTCAGGCAGCTCCCACTGGATAAGGAGATAATGGTCAAATTTAGAGATAAGTTAAGAGATTGGTACCACAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTGCGTATGCTTCGGCTTCTTGGGTGCCAGCATAA 2226 0.3958 MDPNFVGFETTYKIDEHGNVVFLSDPNPNDNDFSITNPYVGPPNSEPLVSSSDAITDSTFEDTDFSETVKYISQILMEEDFEQKPCMCYDPLSLQHTEKIFFDALESNLPLSPNQHPLDVLEIPDSNCCVTDSGNSSSSNELKPLSPDTPVSGGDSGFNSVSNVKSQFIVPDHGLFFNNISDGVLDLDSSETRVLAQNIFSDADSILQFRKGLEEASKFLPQKAQLFTGFENANSNSLMSHEPKGRVGVIKMEGSVRSNSNLSYSSSNSNSHGFLKSRKNHERQESDDEEVRSNKQSAVCVEESEISEMFDRVLLSVENVPLCAEQKDGSVVESRTKVGELDGGKARSKKQGKQGKQGRKKESVDLRTLLVLCAQAVSANDNRTANELLKQIRKHSSPLGDASQRMAHYFANAIEARMVGAGTGTQILYMSQKMFSAADFLKAYQVFMAACPFKKFAHFFANKMIMKTAEKAETLHIVDFGILYGFQWPILIKFLSKIEGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVSFEYKAIPSRNWETIQIEDLNIKSNEVVAVNCLVRFKNLHDETIDANSPKDAVLKLIRKINPSIFVQSIINGSYNAPFFSTRFKESLFHYSAMFDMYDTIISRENEWRSTIEREFLGREIMNVIACEGLERVERPETYKQWQVRNTRAGFRQLPLDKEIMVKFRDKLRDWYHKDFVFDEDNNWMLQGWKGRIAYASASWVPA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0536 741 Pfam GRAS domain family 366 738 IPR005202 -
Mal4g0536 741 MobiDBLite consensus disorder prediction 330 349 - -
Mal4g0536 741 MobiDBLite consensus disorder prediction 259 274 - -
Mal4g0536 741 MobiDBLite consensus disorder prediction 131 154 - -
Mal4g0536 741 MobiDBLite consensus disorder prediction 275 296 - -
Mal4g0536 741 PANTHER SCARECROW-LIKE PROTEIN 34 46 740 - -
Mal4g0536 741 MobiDBLite consensus disorder prediction 328 361 - -
Mal4g0536 741 ProSiteProfiles GRAS family profile. 357 739 IPR005202 -
Mal4g0536 741 MobiDBLite consensus disorder prediction 259 298 - -
Mal4g0536 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 740 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0536 Mal-Chr4 5151174 5153399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0536 68 741 GRAS Transcription Factor Family AT1G07530 49.143 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0536 GRAS 6.2e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0536 - - cam:101504630 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0536 4 5151174 5153399 Mal7g2292 7 80875756 80877924 PCT
Mal7g2293 7 80880234 80882051 Mal4g0536 4 5151174 5153399 PCT