Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0535 ATGCTTTCTCCAAACACATTTTTGCAAGATTTTAGTGTTCCAAATTCATTGAACCATGTAACAAATGGATTTGAGTTGGAAGATTTATCATCTTCACCTTCTTCTGTCATAAGCTTAGATGAAGATCCCTCAGCAGGGAATAGATATTCCAATAACATCCTCAGATACATAAGTGACATTCTCATGGATGAAGAAGATGACTTGGAGCGCAAACCTTGCATGTTGCAGGAATGTTTAAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTTCTTGGCCATAACAATTCTTCACCAAATGATAGCACTGATCCAGATGGGAATTTCTGTCGCACTGCTAGTTTTGAGAGCAATAGCAACAGCTGCACCACTGATAATTCATATGAGTCTGATTCGGTTAACCTTGTTGGCGAATTTGACTCTTCTTACTTACAATTACAAACTCCTTTAGTAGAACAAAACTACTATGGTGTGACACAACCTGATCCAGTGGTGATTGAGCAACAAGCTGCTAGCCATTTTCAAAATGGAACTTGGAGTTGGAATGAAATTCAACCAGTGATGATTGAAGAGGTTTCAGCTCCATTAGTACCAAGAGAAAAGAGAAGTCATAAGATGGATGATAATGATGATGCTTATAATGAACAAGAGGGAAGAGGTAGCAAGCTTTCAGCTATCTTTTCTGATGAATTAGAACCACCAGAGATCTTAGATGAGGTACTTCTTTGTCAGCAAGGAAGGACTCTCACTCAACACCAACAAGCATCACAGAATGTTGATTCAGGAGGAAAGGCAAAGGCAACACGTTCGCGATCGAAGAAAGTATCTACTACTAACAATGCCACAGTTGTGGATTTGTGGACTATGCTTACTCAATGTGCACAGGCCGTGGCAAGCTACGATCAAAGGAACACAAATGAGCTACTCAAGCAGATTAGGCAACACTCTTCACCTTTTGGCGATGGACTTCAGCGGTTAGCTCATTACTTTGCCAATGGTCTTGAGATAAGATTGGCTGCTGAGATTCCATCGTATATGCCGCTTGATGTGGTAACGGCTGGAGACATGTTGAAAGCTTACAAACTATTCGTTACCTCATCTCCTTTGCAGAGAATGACGAATATGTTGTTAACCAATACAATTTTCGCACAAGTGAAGAACGAGAGCAGCGTTCATATCATTGATTTTGGAATTTGCTATGGTTTCCAGTGGCCATGCCTCATCAAAAAACTTTCAACAAGACCTGGTGGTCCTGCAAAGCTTCGAATTACGGGAATTGAGCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGGGCGGAGGAAACCGGAAGGCGTTTAGAGAACTACTGCAAGAAGTTCAATGTTCCATTTGAATACAACTGCATTGCACAGAAATGGGAAACTATCCGGCTTGAGGATCTAAAGATAGACAGGAATGAAATAACTCTTGTTAGCTGTTTAAAAAGAATGAAGAACCTGCCTGATGAAACTGTAGCAGTGAATTGTCCAAGAGAAGCATTGTTGAACCTGATCAGGAAGATTAATCCAAAAATCTTCTTCCATGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGATTTAGGGAAGCACTCTACCACTTCTCATCATTGTTCGATATGTTTGAGGCTAACGTGCCTCGCGAAGACGCGCAAAGGTTGATGCTTGAGAGAGGGTTATTTGGAAGGGATGCCATAAATGTTATAGCTTGTGAGGGTGCGGAGAGAGTCGAAAGGCCTGAGACCTACAAGCAATGGCAGGTCAGGAACAGGAGAGCAGGGTTCAAGCAAATCAGGTTGGATTCTGAGTTAGTGAATGAAACCAAAACAATGGTGAAGAAGGAATACCATAAAGATTTTTCTGTTGATGAGGATGGTAAGTGGGTTTTGCAGGGATGGAAAGGGCGTGTGCTGAATGCTTTATCTGCTTGGATTCCTGCTTAA 1971 0.4165 MLSPNTFLQDFSVPNSLNHVTNGFELEDLSSSPSSVISLDEDPSAGNRYSNNILRYISDILMDEEDDLERKPCMLQECLRLQAAEKSFYDVLGHNNSSPNDSTDPDGNFCRTASFESNSNSCTTDNSYESDSVNLVGEFDSSYLQLQTPLVEQNYYGVTQPDPVVIEQQAASHFQNGTWSWNEIQPVMIEEVSAPLVPREKRSHKMDDNDDAYNEQEGRGSKLSAIFSDELEPPEILDEVLLCQQGRTLTQHQQASQNVDSGGKAKATRSRSKKVSTTNNATVVDLWTMLTQCAQAVASYDQRNTNELLKQIRQHSSPFGDGLQRLAHYFANGLEIRLAAEIPSYMPLDVVTAGDMLKAYKLFVTSSPLQRMTNMLLTNTIFAQVKNESSVHIIDFGICYGFQWPCLIKKLSTRPGGPAKLRITGIELPQPGFRPAERAEETGRRLENYCKKFNVPFEYNCIAQKWETIRLEDLKIDRNEITLVSCLKRMKNLPDETVAVNCPREALLNLIRKINPKIFFHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDAQRLMLERGLFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQIRLDSELVNETKTMVKKEYHKDFSVDEDGKWVLQGWKGRVLNALSAWIPA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0535 656 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 655 - -
Mal4g0535 656 MobiDBLite consensus disorder prediction 198 217 - -
Mal4g0535 656 Pfam GRAS domain family 288 653 IPR005202 -
Mal4g0535 656 MobiDBLite consensus disorder prediction 251 275 - -
Mal4g0535 656 MobiDBLite consensus disorder prediction 198 219 - -
Mal4g0535 656 ProSiteProfiles GRAS family profile. 277 654 IPR005202 -
Mal4g0535 656 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 655 IPR005202 -
Mal4g0535 656 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0535 Mal-Chr4 5142441 5144411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0535 44 655 GRAS Transcription Factor Family AT2G29060 41.875 8.50e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0535 GRAS 2.8e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0535 - - cam:101504630 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0535 4 5142441 5144411 Mal4g0535 4 5142441 5144411 ECH
Mal4g0535 4 5142441 5144411 Mal7g2291 7 80872127 80874331 ECH
Mal4g0535 4 5142441 5144411 Mal7g2294 7 80893807 80895792 PCT