Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0534 ATGCTTTCTCCAAACACCATTCTGCAAGATTCATCATCTTCACCTTCTTCTGGCTCAAGCTCAGAATCCTTGGAAACAACAAGATATTCCAATAACATCCTCAGATACATAAGTGACATCCTCATGGATGAAGAAGATGACTTGGAGCAAAAACCCTGCATGTTGCAGGAATGTTTAAGACTCCAGGCTGCTGAAAAGTCCTTCTATGATGTTCTTGGCCATAACGATCCTTCACCAAATGATGGCACTGACCTAGTTGGAAATTCCAGTCACGCTGCTAGTTTTGAGAGCAATGGCAGCAGCTGCACCACTGATAACTCATACGAATCGGACTGGGTCAACCTTGTCGGCGAATTCGACTCTTCTTCCATACAACTACAAACTCCTTTAATCAACCTTGTCGGCGAAATCGACTCTTCTTCCATACAACTACAAACTCCTTTAATCGAAAAAAACTATGATTTGACAGAAGCTGATCCAGTTGTCATCGAGTCACAAGGTGCTAACCATTTTCACAAAGGAACATGGAGTTGGAATGACATTCAGCCAGTGATGGTGGAAGAAGTTTCACCTTCAACAGTACCAAGAGAAAAGAGAAGTCATAAGATGGATAATGATAATGATACTTGTAATGAACAAGAGGGAAGAAGTAGCAAGGTTTCAGCTATCTTCTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTACTGCTTTATCAGTCAGGAAAGACTCTCACTCAACACCAACAACCATCACAGAATGTTGATTCAGGAGGAAAGGCAAAGGAAACAAGTTCGCGTTTGAAGAAAGTATCTACTACGAAAAATGTCGCAGCTGTGGATTTGTGGGCCATGCTAACTCAATGTGCACAAGCCGTCGCGAACTACGACCAAAGGAATACAAATGAGATACTTAAACAGATTAGGCAACACTCTTCGCCTTTCGGCGATGGACTCCAGCGTTTAGCTCATTACTTTGCTAATGGTCTTGAGATAAGATTGGCTGCTGAGACGCCATCGTATCAGCCTCTTGATGTGGCAAATGCTGGAGATATGTTGAAAGCTTACAAACTATTTGTTACCGCGTCTCCTTTACAGAGAATGACAAATGCGTTGCTAACCAAAACAATTTTCAAGATAGTGCAGAACGAGAGCAGCGTTCATATTATTGATTTTGGAATTTGCTATGGTTTCCAATGGCCGTGCCTCGTCAGAAAACTATCATTAAGACCTGGTGGTCCTCCAAAGCTTCGAATTACGGGAATTGAGCTTCCTAGGCCAGGATTTAGACCTGCAGAAAGGGTGGAGGAAACTGGACGGCGTATAGAAAACTACTGCAAGAAGTTCAATGTACCATTTGAATACAACTTCATTGCACAGAAATGGGAAACCATCCGTCTCGAGGATCTAAAGATAGACAGGAATGAAATAACTCTTGTTAGCTGTTTGTACAGACTGAAGAACCTTCCTGATGAAACTGTGGCATTGAATTGTCCAAGAGAAGCTGTGCTGAAGCTGATCAGGAAGATTAATCCAAAAGTCTTCTTCCATGGAGTTGCCAATGGAAGTTATAGCGCACCATTTTTCCTGACTCGGTTTAAGGAAGCACTCTACCACTTCTCATCGTTGTTCGATATGTTTGAGGCTAACGTGCCTCGTGAAGACACGCAGAGGTTGATGCTTGAGAAAGGTTTGTTTGGAAGGGATGCTATAAATGTTATAGCTTGTGAGGGTGCGGAGAGGGTCGAAAGGCCAGAGAACTACAAGAAATGGCAGGTCAGGAACAGGAGAGCAGGGTTCAAGCAAATCAGGTTGGATTCTGAGTTAGTGAATGAAACCAAAGCAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGATGTGGATGGTAAGTGGGTTTTGCTGGGATGGAAAGGACGCATTTTGAATGCTATATCTGCTTGGGTTCCTGCTTAA 1962 0.4266 MLSPNTILQDSSSSPSSGSSSESLETTRYSNNILRYISDILMDEEDDLEQKPCMLQECLRLQAAEKSFYDVLGHNDPSPNDGTDLVGNSSHAASFESNGSSCTTDNSYESDWVNLVGEFDSSSIQLQTPLINLVGEIDSSSIQLQTPLIEKNYDLTEADPVVIESQGANHFHKGTWSWNDIQPVMVEEVSPSTVPREKRSHKMDNDNDTCNEQEGRSSKVSAIFSDELEPPEILDEVLLYQSGKTLTQHQQPSQNVDSGGKAKETSSRLKKVSTTKNVAAVDLWAMLTQCAQAVANYDQRNTNEILKQIRQHSSPFGDGLQRLAHYFANGLEIRLAAETPSYQPLDVANAGDMLKAYKLFVTASPLQRMTNALLTKTIFKIVQNESSVHIIDFGICYGFQWPCLVRKLSLRPGGPPKLRITGIELPRPGFRPAERVEETGRRIENYCKKFNVPFEYNFIAQKWETIRLEDLKIDRNEITLVSCLYRLKNLPDETVALNCPREAVLKLIRKINPKVFFHGVANGSYSAPFFLTRFKEALYHFSSLFDMFEANVPREDTQRLMLEKGLFGRDAINVIACEGAERVERPENYKKWQVRNRRAGFKQIRLDSELVNETKAMVKKEYHKDFVVDVDGKWVLLGWKGRILNAISAWVPA* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0534 653 MobiDBLite consensus disorder prediction 1 25 - -
Mal4g0534 653 MobiDBLite consensus disorder prediction 72 103 - -
Mal4g0534 653 MobiDBLite consensus disorder prediction 245 262 - -
Mal4g0534 653 MobiDBLite consensus disorder prediction 192 213 - -
Mal4g0534 653 Pfam GRAS domain family 286 650 IPR005202 -
Mal4g0534 653 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 652 IPR005202 -
Mal4g0534 653 MobiDBLite consensus disorder prediction 245 270 - -
Mal4g0534 653 MobiDBLite consensus disorder prediction 190 217 - -
Mal4g0534 653 ProSiteProfiles GRAS family profile. 274 651 IPR005202 -
Mal4g0534 653 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 652 - -
Mal4g0534 653 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0534 Mal-Chr4 5139267 5141228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0534 29 652 GRAS Transcription Factor Family AT2G29060 42.410 1.54e-164 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0534 GRAS 1.7e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0534 - - cam:101504630 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0534 4 5139267 5141228 Mal4g0534 4 5139267 5141228 ECH
Mal4g0534 4 5139267 5141228 Mal7g2293 7 80880234 80882051 ECH