Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0501 ATGAATGGTTCAGGTTTAGGTGGTGGGTTTTTGAGTGGTCCCACTAGGGGTATTTTGGACCTTGAATCTCCATTTCACAGACATCAACCACAGACTCAGTTAGGTCATGGTCAACACCGTGTGAATATGATGACTGGTTTGGAAAATGATAATCAAGTTGGTTTAATTGAAGTGAAAAATTTGAATATGGGTTTGAATTTTGGTAAAGGAAAGGGAATTGCTAGTTCTAATCATGATAATACTAATGATATGAGCGAAGATGATGAACACGGTTATGCGGAAGATGGGAATTGCGAGAATTTTTTCGATGGTGGGAAAGGGAAAAAAGGGTCTCCTTGGCAGCGAATGAAGTGGACGGATAATGTGGTTGGGCTTCTTATAGCGGTGGTGAGTTGTGTTGGTGATGATGGTACAATTGGTGGTGTGGATGGTGTTAAGAGGAAATCTGGGGTGTTACATAAGAAGGGTAAGTGGAAAACTGTTTCTAAGATAATGATAAGTAAAGGTTGTCATGTTTCGCCGCAACAGTGTGAGGATAAGTTTAATGATTTGAATAAGAGGTATAAGAGGTTGAATGAGATACTTGGTAGAGGGACTTGTTGTCAGGTGGTTGAGAATCCTGCGTTGATGGATTCAATGGTTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGGAAGATTTTGAGCTCAAAACATTTGTTTTATAAGGAAATGTGTGCATACCATAATGGACAAAGGGTACCGAATAGCCATGATCTTGACTTGCATAGCTATTCGTTGGAACACGGGAAGTACTCGAGAGATCATGATGGCTCTGATGATGAAGATGAGGATAACAATGAAAGTGAGGATGATGAGTTGGATAATGGAATTAATATTAATGCACGTGGTGATGGAGGGAGGATGGAAGAATTTTATGATAGAAATAAATTAAGTGAGGATGGCCACTTTTGGCCGCAATCTATTGGGATGAAGAAACTTGAGAGTGAAATGGCAAGGGTTTTACAAGACCCCGCAAAGTCACCGTGGGAGAAAAGAGAGTGGATTAAGCAACAATTGTTGCAGCTTCAAGAGCAAAATGTCGACTACCAAGCCAGGGCTTTTGAACTTCAGAAACAGCGGTCTAAGTGGTTAAGATACTGCAGCAAGAAGAATAGGGAGCTGGAGAAGCTGACGATGGAGAACAAGAGAATGAAATTGGAAAATGAGCGCAGGATCTTAAAGCTGAAGGAGAGAGAGCAGGAGGCGGAGTTCAGTAGGTCTGAGATGTCCTTAGACCCTACCTCCATTGGTATCAACAGGCCACAAGGAAGGGAACATATCAACTTGGCTAGACAGCACTAG 1344 0.4167 MNGSGLGGGFLSGPTRGILDLESPFHRHQPQTQLGHGQHRVNMMTGLENDNQVGLIEVKNLNMGLNFGKGKGIASSNHDNTNDMSEDDEHGYAEDGNCENFFDGGKGKKGSPWQRMKWTDNVVGLLIAVVSCVGDDGTIGGVDGVKRKSGVLHKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMVNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRVPNSHDLDLHSYSLEHGKYSRDHDGSDDEDEDNNESEDDELDNGININARGDGGRMEEFYDRNKLSEDGHFWPQSIGMKKLESEMARVLQDPAKSPWEKREWIKQQLLQLQEQNVDYQARAFELQKQRSKWLRYCSKKNRELEKLTMENKRMKLENERRILKLKEREQEAEFSRSEMSLDPTSIGINRPQGREHINLARQH* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0501 447 Coils Coil 346 373 - -
Mal4g0501 447 Coils Coil 381 417 - -
Mal4g0501 447 MobiDBLite consensus disorder prediction 417 447 - -
Mal4g0501 447 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 12 421 - -
Mal4g0501 447 MobiDBLite consensus disorder prediction 272 288 - -
Mal4g0501 447 PANTHER F16F4.11 PROTEIN-RELATED 12 421 - -
Mal4g0501 447 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Mal4g0501 447 MobiDBLite consensus disorder prediction 263 299 - -
Mal4g0501 447 Gene3D - 118 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0501 Mal-Chr4 4738926 4740269 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal4g0501 Myb_DNA-bind_4 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0501 - - ccaj:109806698 675.241